Gene Phep_3590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3590 
Symbol 
ID8254712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4276760 
End bp4278652 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content43% 
IMG OID644937242 
Producthypothetical protein 
Protein accessionYP_003093843 
Protein GI255533471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGA TGGGTAAGAA AATAAGAATA ACATTTGGGC TTGTGTTGTG CTTAACAAGT 
TGTTTTATGC ATTCCGTCCG TTGTGCGGAA AAGGTTCTGG TACTTAAAAG TCCCTCATCT
TCTTTAACGG TTCGTGTTTT TAAGGGGGGG GATAAAGGGT TTTTTTATAC GCTTTCTTTG
AAAAACAGGA CGCTAATACA TGCTTCTCAT CTAGGTTTAA GTATTGCAGG CAGGCCCTTT
TTGAATCCTG CAGCTAAACT GAAACTGATC AGCAGCAATA GCATAGCAGA ATCCTTTTCA
CTGCTCCGTC ACAACTATAA GGTTAAAAAT GTTTCATACA AAAGTTACCG GATTGGCATT
GGCAAAAGCC TGATTGAGTT TGCTGTATTT GATCAGGGTT GCGCTATCCG TTATCATTTA
CCTGCTAAGC AGGTACACAT TACAGCAGAG CAAACGAGTT TTGTTTTGGA TGGAAGTGCA
GGTGCCTGGT TCTTTGAGCG CACAAATAAC TGGAAGCTTA AATCTTACGC CGGCTTGTGG
ACTGAAACGC GAATTGACAG TCTGGATAAA ATTAGCCCTA CTGGCCCTGT ACAGGGAAAG
CCTGTTGTGG CCCAGCTGGC AGATAAAAGT TATTTGTTTA TTGCAGAAGC TGCATTGCAG
GGGTACAGCG GGATGCGGCT TAAAGCCAAT AAAAACAGTC TTACGGTAGA TTTTACCGAA
GGAGATAAAG GTTTTTATGT CCAGCCGAAC CAGTTTCCTT TTACCCCCTG GCGCATCATC
GGCTGGGCAG CAAACCTGAA TGAGCTGGTT AATCAACCCC TGGTTGAAAC ATTAAATGCA
AACCCCGATA GTGCTTTGTT TAAAAATACG GATTATATAA TGCCGGGAAA AAGTGCCTGG
AGCTGGATTA CAAAGGATGG GAACTACCTG GATCCTGTTA CAGAAAAAAG TATCATCGAT
GCCGCTGCCC GGCTAAATTA TACCTATACA TTAATTGACG ATGGCTGGGA GGAAAAATGG
AAACAAAAAT GGGAGGTGCT GAAAGATCTG GTAGAATATG GCCGTAAAAA AAAGATAAAG
GTCTGGGTGT GGAAGGATTC CAAGTTTTTA AGGGATGTGG TGTATCGTGA TGCTTTTCTG
GATACCTTGG GCCGTTTAGG TGTTGCAGGA ATTAAAATAG ATTTCATGAA CAGTGAAGCA
AAGGAGCTGA TAGATTTTGA GACCAGCTTT TTAAAAGCTG CCGCTAAAAA AAAGCTGATG
GTCAACTTTC ATGGCTGCCA GACCTCTACA GGGGAGTATC GTACCTATCC CAATGAAATG
ACCAGGGAAG GTATCAGGGG AATGGAACTG AACATCATGA ATGAACCCAT TCCAGCATGG
CACAATGCGG CGTTGCCCTT TACAAGGTTT ATCATGGGAC CTGCAGATTA TACACCTGGA
CTTTTTTCCA AAAGAGGGGC AACAACACTT ACGCATCAGC TGGCCCTACT TTATTTGTTT
GATTCACCTT TTCAATGCAT TGCCGAAAAT CCGGTAACAC TTTTAAAAGA TACCTTATAT
CGTCCTATAC TTCCTTTGAT AAGGGATTTA CCAACAACCT GGGACAGTAC ATTGGTCCTA
AATGGAAGCA GGATAGGCCA TTGCGCCATT GCAGCCAAAA AGAAAGGGAA TGACTGGTAT
TTAGCCGCAA TTAACGGGCT TGCTGCAGAA AATTCCATAA CCCTGGATCT ATCCTTTATA
AAAGACCTGT CGGCCTATAC GGCAATTGTT ATCTGCGATG CTAAGGGTGC ATTTTCCGCT
TCATCGGTAA TTCCTGCCAT GTTAGATGAA AAGAATATAT CCATTCCCCC TGCGGGAGGT
TTTGTAGTCC ATTTGAAACG GAAAGATAAA TAG
 
Protein sequence
MRQMGKKIRI TFGLVLCLTS CFMHSVRCAE KVLVLKSPSS SLTVRVFKGG DKGFFYTLSL 
KNRTLIHASH LGLSIAGRPF LNPAAKLKLI SSNSIAESFS LLRHNYKVKN VSYKSYRIGI
GKSLIEFAVF DQGCAIRYHL PAKQVHITAE QTSFVLDGSA GAWFFERTNN WKLKSYAGLW
TETRIDSLDK ISPTGPVQGK PVVAQLADKS YLFIAEAALQ GYSGMRLKAN KNSLTVDFTE
GDKGFYVQPN QFPFTPWRII GWAANLNELV NQPLVETLNA NPDSALFKNT DYIMPGKSAW
SWITKDGNYL DPVTEKSIID AAARLNYTYT LIDDGWEEKW KQKWEVLKDL VEYGRKKKIK
VWVWKDSKFL RDVVYRDAFL DTLGRLGVAG IKIDFMNSEA KELIDFETSF LKAAAKKKLM
VNFHGCQTST GEYRTYPNEM TREGIRGMEL NIMNEPIPAW HNAALPFTRF IMGPADYTPG
LFSKRGATTL THQLALLYLF DSPFQCIAEN PVTLLKDTLY RPILPLIRDL PTTWDSTLVL
NGSRIGHCAI AAKKKGNDWY LAAINGLAAE NSITLDLSFI KDLSAYTAIV ICDAKGAFSA
SSVIPAMLDE KNISIPPAGG FVVHLKRKDK