| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3553 |
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| Symbol | |
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| ID | 8254674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4226820 |
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| End bp | 4229627 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937204 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003093806 |
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| Protein GI | 255533434 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.975674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG AAATCAATAA AGATCCACAT ACAAACATTA TCATAAAAGG TGCCAGAGTT
CATAATCTTA AAAATATAGA TGTTGCCATA CCTAAAAATA AACTGGTAGT GATTACCGGA
ATGTCGGGCT CGGGCAAGTC TTCGCTGGCT TTCGATACTT TGTATGCAGA GGGGCAGCGC
CGCTATGTAG AGAGTTTGTC TTCATATGCC AGGCAGTTTA TGGGAAGGAT GAACAAGCCC
GATGTGGATT ATATTAAAGG GATAGCACCG GCAATAGCAA TTGAACAAAA AGTGATCACC
TCCAACCCGC GCTCCACCGT TGGTACTTCA ACAGAAATAT ACGACTATCT GAAACTCCTT
TTTTCCAGGA TCGGCAAAAC CTATTCGCCG CAATCGGGCA AAGTTGTAAA AAGAGATACT
GTTACCACTG TTGTTGATTT TATATCTGCA CTGGGCAATG AAAGTGTGGT TACCATCTTT
TGCCCCTTAT TCCCACACAA CAACAGGTCC TTAAAAGAAG AGCTGGCGGT GCTTTTACAA
AAGGGTTTCC TCAGGGTTTC CTATAAAAAG AAGGTACTTA AAATAGAGGA TATCCTGGAA
GATAAGGATT TTAAGGATTT TGAACTTAAG GATGAACAAA CTGTGCAGAT ATTGATCGAC
CGCATTGTAG TCAACCCAGA AGAAGAAACG TTAAGCCGTA TTGCCGATTC TGTACAAACT
GCGTTTTTTG AAGGAAAAGG CGATTGTTAT GTAGAACACG AGGGGAAGTT AAACCATTTC
TGCGATAGGT TCGAACTGGA TGGGATCCGC TTTGAAGAGC CCACGCCTAA TTTTTTTAGT
TTCAACAATC CTTATGGTGC CTGTAAAAGG TGCGAAGGGT ATGGCAGCGT GATCGGTATA
GATGAAGATC TGGTGATCCC CGATAAGAGT AAAAGTGTTT ACGATAATGC TATTGCACCC
TGGCGGGGAG AAAAAATGCG CGAATGGCTG AACAAACTGG TCAGAAATGC CGAGAAATTT
GACTTCCCGA TCCACCGCCC TTATAGCGAG CTTACAGAAA AGGAACAGAA ACTGATCTGG
GCAGGCAACA AGTATTTTGG CGGACTGGAT GATTTTTTTA AAGAGCTGGA AGAGCAGACC
TATAAAATCC AGTACCGGGT AATGCTTTCG AGGTACAGAG GAAAAACCAT CTGTCCGGAT
TGTAAAGGGT CAAGGTTGCG CAAGGATGCT GCCTATGTTA AAATAGAAAA TAAATCTATC
ATGGATGTGG TACTGATGCC ATTGGCTACC ATACTTGATT TTTTTGAAAA CCTGAAACTT
TCTGATACAG AGCAAAAGAT CTCCAAACGC TTACTGGCCG AGATTGTAAA CAGGGTACTG
TATCTAAACA ATGTGGGCCT GGGCTACCTG ACTTTAAACC GTCTTTCCAA TACCCTTTCG
GGAGGAGAAT CGCAACGAAT TAATCTGGCC ACTTCTTTAG GCAGCAGTCT GGTGGGCTCC
ATTTACGTGC TCGACGAGCC CAGTATAGGC CTGCATCCCA GGGATACCAA TAAACTGATA
GAAGTACTGC AGGCCCTCCG TAATGTGGGC AATACTGTGT TGGTTGTAGA GCATGAAGAA
GAAATGATGA AGGCTGCCGA TCACATCATT GATATAGGCC CCGAGGCAGG CACGCATGGG
GGCAACCTCG TATTCAGTGG TACTTATAAA GAAATTATAA AGGATAAAGA CAGTTTAACC
GGCCGTTACC TTTCAGGTGC CGAAAAAATA GCCATCCCTG CCAAACGCAG AGCTTGGAAA
GACCATGTTT TAATTAAAGG GGCAAGAGAG AACAACCTTA AAAACATCGA TGTAAAAATC
CCACTGGGTA TATTTACAGT AGTCAGTGGT GTTTCGGGCT CCGGAAAAAC CAGTCTGATC
AAAAAAATCT TTTATCCTGC CTTGCAAAAA GCGATAGGCA ACTATTCCGG TGAGCAGACC
GGTGCATACG ATGGTATTTA TGGCAATTAC GACCTGGTGA GCCAGGTGGA AATGGTAGAT
CAGAATCCTA TTGGCCGTTC GTCCAGGTCA AACCCCGTTA CTTATGTTAA GGCATGGGAT
GATGTAAGGG CCTTGTTTTC GGCCCTGCCC GCCTCAAAAG CTGCAGGACT GAAGCCAGCT
GCCTTTTCTT TTAATGTGGA AGGCGGGCGC TGTGATGTTT GCCAGGGAGA AGGAGAGGTG
AAGATAGAAA TGCAGTTTAT GGCTGATATT TACCTGCCCT GCGAAACCTG TGGCGGCAGA
AGATTTAAGC AGCAGGTACT GGATGTAACC TACCAGGATA AAAATGTAGC AGATATACTG
GACCTGACCA TAGAAGAGGC TGTAGCTTTC TTTAGCAATG AGCCTAAAAT ACTGCATAAA
CTGCAACCCC TGGTTGATGT TGGCCTGGGC TATGTCCATC TGGGCCAGTC CTCTAATACC
CTCTCGGGCG GTGAGGCCCA GCGGATTAAA CTGGCTTCCT TTTTAATTAA AGGAAACAAT
GCCAATAAAA CCATGTTCAT TTTTGATGAG CCCACCACCG GCCTGCACTT TCACGACATT
AAAAAACTGC TGATCGCACT GAACACCCTG ATCGAGCAAG GCAATTCTGT CTTGGTGATA
GAACACAATA TGGACATGAT CAAATCAGCT GACTGGGTCA TCGACATTGG CCCGGAAGGC
GGGGATAAAG GTGGCAATGT TGTTTTTGAA GGTACCCCGG AAGCATTGCT TTCTGCCAGA
TCGTCCTACA CGGCCAGGTA TTTAAAAGAC CATATGAAAC CAGCATAA
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| Protein sequence | MNKEINKDPH TNIIIKGARV HNLKNIDVAI PKNKLVVITG MSGSGKSSLA FDTLYAEGQR
RYVESLSSYA RQFMGRMNKP DVDYIKGIAP AIAIEQKVIT SNPRSTVGTS TEIYDYLKLL
FSRIGKTYSP QSGKVVKRDT VTTVVDFISA LGNESVVTIF CPLFPHNNRS LKEELAVLLQ
KGFLRVSYKK KVLKIEDILE DKDFKDFELK DEQTVQILID RIVVNPEEET LSRIADSVQT
AFFEGKGDCY VEHEGKLNHF CDRFELDGIR FEEPTPNFFS FNNPYGACKR CEGYGSVIGI
DEDLVIPDKS KSVYDNAIAP WRGEKMREWL NKLVRNAEKF DFPIHRPYSE LTEKEQKLIW
AGNKYFGGLD DFFKELEEQT YKIQYRVMLS RYRGKTICPD CKGSRLRKDA AYVKIENKSI
MDVVLMPLAT ILDFFENLKL SDTEQKISKR LLAEIVNRVL YLNNVGLGYL TLNRLSNTLS
GGESQRINLA TSLGSSLVGS IYVLDEPSIG LHPRDTNKLI EVLQALRNVG NTVLVVEHEE
EMMKAADHII DIGPEAGTHG GNLVFSGTYK EIIKDKDSLT GRYLSGAEKI AIPAKRRAWK
DHVLIKGARE NNLKNIDVKI PLGIFTVVSG VSGSGKTSLI KKIFYPALQK AIGNYSGEQT
GAYDGIYGNY DLVSQVEMVD QNPIGRSSRS NPVTYVKAWD DVRALFSALP ASKAAGLKPA
AFSFNVEGGR CDVCQGEGEV KIEMQFMADI YLPCETCGGR RFKQQVLDVT YQDKNVADIL
DLTIEEAVAF FSNEPKILHK LQPLVDVGLG YVHLGQSSNT LSGGEAQRIK LASFLIKGNN
ANKTMFIFDE PTTGLHFHDI KKLLIALNTL IEQGNSVLVI EHNMDMIKSA DWVIDIGPEG
GDKGGNVVFE GTPEALLSAR SSYTARYLKD HMKPA
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