Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3516 |
Symbol | |
ID | 8254637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4184246 |
End bp | 4187179 |
Gene Length | 2934 bp |
Protein Length | 977 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937167 |
Product | peptidase M16 domain protein |
Protein accession | YP_003093769 |
Protein GI | 255533397 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACA AATTATTATT GCTTGTCTGT TTGCTGATAA CAGGTACAAG CCTGATGGCG CAGTCCACTT ATCAATGGAA AACAGCCTCT TCCGGTGGTT ACACTTATAA ATACGTAACC AACGACCCTA CAAAATCCCG TTTCTATACT TTAAAAAATG GACTTACGGT TGTTTTATCA CCAAACCCCA AAGAGCCGAT TATTGAATTC CGCCTGGCCG TAAGGGCCGG CAGCAATACC GATCCGCGTA CAGCCACCGG CCTGGCCCAT TACCTGGAGC ACCTGCTGTT TAAAGGCACC GATAAATTTG GCACAATGGA CTTTGTCAAA GAAAAACCCC TGCTGGACAA GATAGATGCT TTGTACGAAC AGTACCACGA AACCACAGAT CCGGCAAAAC GCAAGGAAAT CTATGCCCAG ATCGATAAAA CATCAGGAGA AGCCTCTAAC TACGCTATCG CCAACGAATA CGATAAAATG ATGAAGGCCA TTGGCGGCCA GAGCACCAAT GCCCATACCT GGTACGAAGA AACCGTTTAC AATGAAGATT TTCCTTCAAA TGCGACCGAT CAGTTCCTGG CCCTGCAGGC AGAACGCTTC CGCAATCCCA TTTTCCGTAT TTTCCATACG GAACTGGAAG CAGTATATGA AGAAAAAAAC CGGGGGCTCG ACAATGATGG CTGGAAAGTA AACGAACAAA CCGGAGCCCT GCTGTTCCCC ACACATAATT ACGGGCAGCA AACCACCATC GGTACTGTTG AGCACCTGAA GAATCCCTCC TTACTGGAAA TCAGAAAATA TTACAACAAA TATTACGTAC CCAACAATAT GGTCATTGCA CTTGCCGGCG ACCTTAACCC CGACGAGATG ATCAAAAAAG TAGATAAGGC CTTTGCTTAC ATGAAAGCCA AACCATTTGA GCTGTACAAT CCGGCACCTG AAAAACCACT TACGCAGGTG CAAAAAATAG ACATTTATGG GCCAAGCGCC GAAAGTGTAA GGATGTCGTA CAGGGGTTAT GCACAAAATA CAACCCAAAG CATGCTGCTC GACCTGATCT CGAGCATCCT ATCTAATGGA AAAGCGGGAC TGCTCGACAT CAACTTAAAC AAACAGCAAA AAGTCTTGAG CTCAAGCGCA GGTTACCAGC AGATGAAAGA TTATGGCATT TTCACACTTA TTGCACAACC TAAACAAGGC CAGAGCCTGG AAGAAGCCCA AAAGTTATTG CTGCAACAAT TGGACATCCT TAAAAAGGGA GATTTTGATG AAAGCCTGAT CAAAGCTACG GTAGCCAACA GCAAGCTGGG CTTACTGGAA GCTTTTGACA AGAACAGTTT CCGGGTAGAA TCTGTAACCA ATGAATTTAT CCTGAACCGT GCCGAAAACT GGGACAAATC TTTAAATGCC CTGGATGCCA TGGCCAAAAT AACCAAAAAG CAGGTGATAG ATTTTGCCAA CCAGTTTTTT AAAGACAACT ATGTAATAGC CTTTAAGCAC AAAGGCGAAG ACAAGAGTAT ACAGAAGGTA GAAAAACCGG TCATCACACC AGTAAACACC AATGCCGGCG AGACCTCTGA ATTCACTAAA AACCTGCTGG CCATGCAGGT AAAACCCATT GCGCCTAAAT TTTTAGATTA TAAAAAAGAC CTGAACTTTG GAAAGGCCGG CATTGCCGAT GTAATTGCCG TACAAAACAA GGACAACAGT ATTTTTAACC TGACCTACCG TTTTGATATT GGTGCCTGGA ACTATAGGCT ACAACCTTAT GCAGCCTCGT ACCTTGCTTT TTTAAGTACC GACAAATACA CCGCAGAAGA GATCAGCAAA CAGTTTTATA ACATCGCCTG CAGTTATTCC TTTAATGTGA GCAATGAGGT GGCCAGTATC AACATCAGCG GTCTGCAGGA AAATTTTGAT CAGGCCGTAA GTCTGGTTGA ACATATTTTT GCCAACTGCA AACCCAATGA GCAGGCCCTG ACAGAACTGA AAAGCCGCAT CTTAAAATCA AGGGAAAACA ACAAGCTCAA TAAAGCCTCT ATTTTAAGTG GCCTAACCAC TTATGCACAG TATGGCGCCA GCAATCCCTT CAACTATACC CTAAGCAACG AAGAAATAAA GAACATAACT TCAGATCAGC TGGTCTATAT ATTGCACAAC ATCAACAACT ACAAGCATAC CATTACATAT TACGGACCAC AAACACTGGC TGCTTTTACT GCGGGCATCA GTAAACTACA CAATTTACCC AAAGAATTTA CACCCGAAGC CCCTGCTAAA AAATTCAGCT ATGCGGCCGA AAATGGCAAC AAGGTATATT TTGCCGATTA TGACATGGTG CAGTCGGAAA TCCGCTGGGT ACGCAACGGC GGGCCTTATA ACCAGGCATG GGCACCAAAA ATAAACTTAT TTAACAGCTA TTTTGGAGGT GGTATGGGTT CTGTGGTATT CCAGACCATC CGTGAATCAA AAGCCCTGGC CTACTCTACT TTTGCTGTAT TTTCTTCACC GGATAAAAAA GAGAAAAATT ACACCATGGT GGCTTATGTA GGCAGCCAGG CCGACAAAAT GAATGATGCC GTTAAAGGCA TGAACGAACT ACTGAATACC TTACCACGAA CAGACAAGGC TTTTGATGCT TCAAGATACA ATGCGCTGAA TGCCATTGAA ACCAGCCGGA TTACCAAAAA CGACATTATT GGCGCTTACT TTTCCGATAA GAAACTGGGC TTTGACCATG ATTCGAGAAT GGATGTATAC CAGGGTTTAA AACCCCTTAC ATTTGGGGAC ATAAAAACCT TTCATGAAAA CAATGTAGCC AACAAGGCCT ATAATTATTG CATTGTTGCT TCAGAGAAGA ACGTAAAGAT GGAAGACCTG CAGAAATTTG GCACTGTGAC CAAGCTGAGC CTGGAACAGA TATTTGGTTA TTAA
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Protein sequence | MKHKLLLLVC LLITGTSLMA QSTYQWKTAS SGGYTYKYVT NDPTKSRFYT LKNGLTVVLS PNPKEPIIEF RLAVRAGSNT DPRTATGLAH YLEHLLFKGT DKFGTMDFVK EKPLLDKIDA LYEQYHETTD PAKRKEIYAQ IDKTSGEASN YAIANEYDKM MKAIGGQSTN AHTWYEETVY NEDFPSNATD QFLALQAERF RNPIFRIFHT ELEAVYEEKN RGLDNDGWKV NEQTGALLFP THNYGQQTTI GTVEHLKNPS LLEIRKYYNK YYVPNNMVIA LAGDLNPDEM IKKVDKAFAY MKAKPFELYN PAPEKPLTQV QKIDIYGPSA ESVRMSYRGY AQNTTQSMLL DLISSILSNG KAGLLDINLN KQQKVLSSSA GYQQMKDYGI FTLIAQPKQG QSLEEAQKLL LQQLDILKKG DFDESLIKAT VANSKLGLLE AFDKNSFRVE SVTNEFILNR AENWDKSLNA LDAMAKITKK QVIDFANQFF KDNYVIAFKH KGEDKSIQKV EKPVITPVNT NAGETSEFTK NLLAMQVKPI APKFLDYKKD LNFGKAGIAD VIAVQNKDNS IFNLTYRFDI GAWNYRLQPY AASYLAFLST DKYTAEEISK QFYNIACSYS FNVSNEVASI NISGLQENFD QAVSLVEHIF ANCKPNEQAL TELKSRILKS RENNKLNKAS ILSGLTTYAQ YGASNPFNYT LSNEEIKNIT SDQLVYILHN INNYKHTITY YGPQTLAAFT AGISKLHNLP KEFTPEAPAK KFSYAAENGN KVYFADYDMV QSEIRWVRNG GPYNQAWAPK INLFNSYFGG GMGSVVFQTI RESKALAYST FAVFSSPDKK EKNYTMVAYV GSQADKMNDA VKGMNELLNT LPRTDKAFDA SRYNALNAIE TSRITKNDII GAYFSDKKLG FDHDSRMDVY QGLKPLTFGD IKTFHENNVA NKAYNYCIVA SEKNVKMEDL QKFGTVTKLS LEQIFGY
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