Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3366 |
Symbol | |
ID | 8254485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3994458 |
End bp | 3996059 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937018 |
Product | hypothetical protein |
Protein accession | YP_003093622 |
Protein GI | 255533250 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACAAC AAATTATAAT TATAGCGCTT ATAGCGTTTG GCTTATTGTC TTGTACCAAA AATTTTGAAG AAATCAATAC AGATCCGAAC AAACCTGTGA AAGTGCAACC GGATTTTTTA CTGACCACTT CCATTTTTGA AACAATGAAC CTGTTTGGCG GCAATATGAA CCGTGTGGTA TTTTTTAACT ATACACACCA TTTCTCTGGC TTTCAGGGTA ATTTTCAGCG CTACAACTAC GACCTGAACG AGGACAATAC TTATTGGCGC GCAGTTTATG TACAAGCCGC CCAACCTGTA AACCAGATTA TTGTAAATTA TAAAAATGAT CCTGCTTATA CCAACAGGGT GATGATTGCG CGCATATGGA AAAATTATAT CCTATCCAAT GCAGTGGTGA TATGGGGAAG TGTTCCTACG GAAGGTGCCT TGCTGGGTAC GCCAAGTGTT CCTTATACCA AAGAACAGGA TGTATATGTG AACGTATTGG CTGATCTTAA AAATTTAACG GATTCATTAA GCCTTACCGG TGATAAATAT ACTGTAAATG CAGATAAGAT TTTTGGCGGT GACCTTTTAA AATGGAAGAA ATTTGCAAAT ACACTGAGGT TAAGACTGGC CATCCGGATT TCTAACGATG CGCCCAATGG CGATCCTGTG TTAGCCAAAA GGGTAGTAGA AGAAGTTTTT CAAACGGAAC AGTATACGAT GAAGGCCCAG ACTGAAACGG CTGCGGCAAA CTGGGGCACA ACCAGTGATA CCTGGAGTCC GCTTTACGAC AGGGCGGTAT ACAATTATAC TGCCAACAAG GCCACTATTC CGGTTACCAA TGAGTCGCTG GTTTACCACA TGGCGCCTTA CAACGATGCA CGGTTAACTA TATATGCACA GCCGGCGAAA CAAGGCCCGC AAACCGGAAC TTACTTTGGA CAGAACATCT CTTATGGAGG GGGATCAACT TATGCTAACG GTTTAACCAA TCCGCATACC GGCTTAAAAC AAGATGACTA TTCGGCTATA GGTGAGCGGT TTTTAAAGCC CGATGCGGAA TATGTGTTCC TTTCATATGC TGAAGCTTGT TTTTTAAAGG CGGAAGCTGC GTTAAAGGGA TGGTGGGGCA ACCCAAATGC TTCGCAGTAT TATTATGAAG GTATAGATGC TTCTTTTAAC AGGTATGGCC TTACTGTAAC ACAGGCAAGC AATTATAAAA ATACACCCGG CATTAAGTGG AGTACGGCAT CTGATACCGT TGGCAGGAGC GCCCAATTTA AAGACTGGTT GCAGATCTGT TCCAGTTATA TTCCTGCAGG TGATAATTTG CGTCAGATTG TGATGCAACA TTGGCTGGCC ATCCCGGGGC AGGGCGTAGA TGCCTGGACA CTGATCAGAA GGACCAGGTT GCTTGAATTT CAGCCGCAAT TTGCTACCTA TGATGGTACT TACGCCTATG TGCCTAACCG TTTGCCATAT CCCTCAGATG AATTGCAGAC CAATATTGGA GAAGTAAATA AAGCCATTGG CTGGCTGGGC GGTGCCGATA ACCTTAACAC GAAGTTATGG TTTGCGTTGC CCGTTAAGAA AAATCCTTTT TTACCATTTT AA
|
Protein sequence | MKQQIIIIAL IAFGLLSCTK NFEEINTDPN KPVKVQPDFL LTTSIFETMN LFGGNMNRVV FFNYTHHFSG FQGNFQRYNY DLNEDNTYWR AVYVQAAQPV NQIIVNYKND PAYTNRVMIA RIWKNYILSN AVVIWGSVPT EGALLGTPSV PYTKEQDVYV NVLADLKNLT DSLSLTGDKY TVNADKIFGG DLLKWKKFAN TLRLRLAIRI SNDAPNGDPV LAKRVVEEVF QTEQYTMKAQ TETAAANWGT TSDTWSPLYD RAVYNYTANK ATIPVTNESL VYHMAPYNDA RLTIYAQPAK QGPQTGTYFG QNISYGGGST YANGLTNPHT GLKQDDYSAI GERFLKPDAE YVFLSYAEAC FLKAEAALKG WWGNPNASQY YYEGIDASFN RYGLTVTQAS NYKNTPGIKW STASDTVGRS AQFKDWLQIC SSYIPAGDNL RQIVMQHWLA IPGQGVDAWT LIRRTRLLEF QPQFATYDGT YAYVPNRLPY PSDELQTNIG EVNKAIGWLG GADNLNTKLW FALPVKKNPF LPF
|
| |