Gene Phep_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3315 
Symbol 
ID8254434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3933037 
End bp3933522 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID644936967 
Producthypothetical protein 
Protein accessionYP_003093571 
Protein GI255533199 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.300584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATGA AAAAGAAAGC AGAAACACGT ACTGAACTTG CCGAACCGGC AGTAGCTTAT 
GGGGCTTTGA ACCCAACCTC ACTGGTGGGT TTATTGGGCA GCAGCTATGC CACATCAACA
GATTTTGATT TGCTAAACCT TGCACGTAAA GGCGTTTCTA AAAAAGCGTT GTTAAGTTTA
GCAAAGCAAA TATCGCTTAC CATACAGGAG GTAGCGGGTA TCATGCACAT TTCAGAACGA
ACTTTACAAC GTTATACCCC TGCTACTTTA ATCAAAACAG AACATGCAGA AAAGGCCATA
GAGCTGGCCA GGTTATACCA GCGTGGTACT GAAGTTTTTG GTACCATTGA TAACTTTAAC
GACTGGATGA AAACCCCTAA TTATACCTTA AACGGTGAGG CTCCCTTAAA CCTGCTGGAT
ACTTCTATAG GCTTTGAACT GATTTTGCAA ACCCTTGGCC GTATAGAGTA CGGTGTTTTT
AGCTAA
 
Protein sequence
MGMKKKAETR TELAEPAVAY GALNPTSLVG LLGSSYATST DFDLLNLARK GVSKKALLSL 
AKQISLTIQE VAGIMHISER TLQRYTPATL IKTEHAEKAI ELARLYQRGT EVFGTIDNFN
DWMKTPNYTL NGEAPLNLLD TSIGFELILQ TLGRIEYGVF S