| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3307 |
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| Symbol | |
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| ID | 8254426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3918398 |
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| End bp | 3921127 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936959 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003093563 |
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| Protein GI | 255533191 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.106188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAG CTAAATCCTG GTTTTGTACG CTTCTTATTT ATCTAGCATT TTTTGGTTTT
GTAGTGGCAC AACCTGCAGA AAACATACCC CAATATCTCC GTAAAACGCT CGATTCTTTA
AAAACAAAAG ATAATCTCTC GGAATGGATC TATACCAGGA TTGATTATTG TTATCACAAC
CCCAGTCAAA GTCTGCCTTT TTTAATGCGC ACAGAACGGG ATAGCTGGCG TAAACCGCAA
TATACTCCTG AAAAAGAAGC CTGGTTAATG CTCCTCAGTA ACCTGGGCTA TAACCAGATG
TATTCCGGAA ATATCCTTCA ATCCATATCT TATTATGAAC TGGCTTATAA TTATTATATA
AACCATAAAC TGAATGTGGA GGGTATAGCC GAATATGTCT TGAAACCCTG GGCAAACAAT
TGTACCCGTT TGGGCGATTA CGAAAAGGCG CTTTTCATTC AGCAAAAAAC GCTCGACTAT
GCAAACAAAG AGCGCAATGA TTCGTTAGCT GTGGCTGTTT ATAATAACAT GGCCATCTCT
TACCGTTCTT TAGGCGATTT TAAAAATGCA GAGGACTGTA TTCTACTTGG CAAAAAAAAA
GCCGGCTATA CAGCTGTTGA GCTAATTTTA TTAGACAATA CACTGGCTGA TATTTATAAT
GATAAAGAAG AACTGGAGCT TGCCGAAAAA GTGATCGGCA AGAATATTGC CCGGCAAGAG
AGCCGTAAGC AAGATTTCGA AACTGCTTAC TGGCTGATGA GCAGTTACAT TACCGCAGGT
AACATCCAGT TCAGGAAAAA TAATTTCAGT TTGGCCTGGA AGTATTATAA ACTGGCCTTA
AGCATTAATG ATCAATATTA TAAGGGGAAC CGCCTAAGGG AAAAGGCTTA TACCTATACC
CAGATGGGTA AGATTAAGCT GGAACAAAAA CAGGCGGCTG AAGCCATACA TTACTTTAAC
CAAACTTTAA GCTCCTTTGG CCTGATAGAC AACAGTCTGC AAATCCCACT AAAAAAAATA
TTTGGGGATA ATCGTCTGGT AGATGTTTTT TACCAAAAAT CGCTGGCACT TAACTTACTG
GGAAAAGAAA AGGAAGCGCT GGAAAACATC CGCCTCGCTC TGCTTGCTGC AGATAAGATC
CGCTTTGAAC TTGCAGATGT AAAAACCAAA CAACGCTTTC AGGCCGAGAC CAAACAGATG
GCAGAAAAAG CAATCGCCAT TGCTTTTGAT TTGCTTCAAA AAACAAAACA GCATAACTAT
GCAGTAGCAA TTGTTGACAT CATTGAGCAA GCCAAAGCCC GTACCCTGTT GGACGATATC
AGAAGAAGCC AGCAGCAGTT AACGCTTTCA ACAAATGACA CCCTATTTCA ACAAAAAGCA
AAGCTTGAAC AGGCTATCGC CTACAATGAG AGGGAACTGT TACAAAGTAA GGGGGATATT
AAAGAAGCAG AACAACGCTA TGCTGTATTA AAGTTTAAAC TGGAAGCGCT GGAAAAGGAT
TTAACCAAAC GTTATCCATC CATGATCATA AATAAAGATA GTCCAGGATT TGGGCGTACC
GCTGAACCGT TAAGCCAATT GCCTGCACAT GCTCATTTCA TTGCGTTCTT TTTAGGCACA
CAAAATCTTT ATGTGGTAGA AATTTACGGC AACAGGGTAA AACACATTAA ACAGGTCCGG
GCAGCCCCGG CAATAAAAAA AACGATCTTC AATTTTGTAA GTACTTATTA CCATAGTGGC
CCCTCAGCAA TGATGAATCA GCCAGAGGCC TTCTTTTTGG CTTCAAATCA GATTTACAGA
GCTTTACTTG GTGATCTTAA ATTTAACAAA AATGATAAAC TGATCATTAT ACCCGATGAA
ATTATTGGTT ATTTATCCTT TGACGGCCTG ATTACGGATA AAAATTACGA ACCATCCATA
GCAAACTGGC CCTACCTTAT TAGAAGCCAG TCCTTGTCCT ATGCTTTTTC TATCCAGACC
TGGATAAACC AGGCAGCAAA AAAAACTATC CAAACCCCTA ATTTTTCGGG TTTGTTTATT
ACCCATCAAA ATAAAAACAA GCAATTTATC CCTGCTGTAG CCAAAGAAGC TGAGGCTATA
GAGAAAATTA TCGGCGGAAG TTTCATGAAA GATAAAGAGG CAGGTGTAAA AGATTTTTTT
AATGCATTTG ATAAAGCAAA TGTATTGCAT ATAAGCACAC ATGCTTACCT TTCCGGACTG
CAAAAAGAAC CCACCTTGTC CTTTAATGAC AACGAAGTGT TTCTATTTGA ACTATCTGCC
AGAAAAACGG CTCCCGACCT GATCGTATTA AGTGCATGCA GAACAGCAGA TGGTATAATG
AATGCAAGTG AGGGCATTAT TAGTTTGAGC AGAGGATTTG CAGCAATAGG TACCGGGGGC
ACTATTGCAG GACTATGGAA CGTAAACGAC AAGGCAGCAT CAGAAATTAC GGCAACCTGT
TACAGCAACA TGTTGCAGGG ACAGGAAATC AGCACGGCAT TACACCATGC CAAACTAAGC
TGGCTGCAAA ATAAAGAAAG ACAGGCACAG GAATACCTGC CCTATTACTG GGACCCACTT
ATTTATATGG GCTACGATAA AAAAGTAACA TTAAAGCCTG CCCAAAGCAT GCTGCAGACC
TACGGACTGC CCGCCACCCT CTTACTGGCC GCTGCATCCG GTATTTATCA CCTTTTAAAG
ATCAGAAAAA AAACTAAACG CCTTGTTTAA
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| Protein sequence | MRIAKSWFCT LLIYLAFFGF VVAQPAENIP QYLRKTLDSL KTKDNLSEWI YTRIDYCYHN
PSQSLPFLMR TERDSWRKPQ YTPEKEAWLM LLSNLGYNQM YSGNILQSIS YYELAYNYYI
NHKLNVEGIA EYVLKPWANN CTRLGDYEKA LFIQQKTLDY ANKERNDSLA VAVYNNMAIS
YRSLGDFKNA EDCILLGKKK AGYTAVELIL LDNTLADIYN DKEELELAEK VIGKNIARQE
SRKQDFETAY WLMSSYITAG NIQFRKNNFS LAWKYYKLAL SINDQYYKGN RLREKAYTYT
QMGKIKLEQK QAAEAIHYFN QTLSSFGLID NSLQIPLKKI FGDNRLVDVF YQKSLALNLL
GKEKEALENI RLALLAADKI RFELADVKTK QRFQAETKQM AEKAIAIAFD LLQKTKQHNY
AVAIVDIIEQ AKARTLLDDI RRSQQQLTLS TNDTLFQQKA KLEQAIAYNE RELLQSKGDI
KEAEQRYAVL KFKLEALEKD LTKRYPSMII NKDSPGFGRT AEPLSQLPAH AHFIAFFLGT
QNLYVVEIYG NRVKHIKQVR AAPAIKKTIF NFVSTYYHSG PSAMMNQPEA FFLASNQIYR
ALLGDLKFNK NDKLIIIPDE IIGYLSFDGL ITDKNYEPSI ANWPYLIRSQ SLSYAFSIQT
WINQAAKKTI QTPNFSGLFI THQNKNKQFI PAVAKEAEAI EKIIGGSFMK DKEAGVKDFF
NAFDKANVLH ISTHAYLSGL QKEPTLSFND NEVFLFELSA RKTAPDLIVL SACRTADGIM
NASEGIISLS RGFAAIGTGG TIAGLWNVND KAASEITATC YSNMLQGQEI STALHHAKLS
WLQNKERQAQ EYLPYYWDPL IYMGYDKKVT LKPAQSMLQT YGLPATLLLA AASGIYHLLK
IRKKTKRLV
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