| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3243 |
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| Symbol | |
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| ID | 8254362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3848649 |
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| End bp | 3849440 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644936896 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_003093500 |
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| Protein GI | 255533128 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0432907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATTA AAAACAGGCC AACCTGGCTT GATTATCTGG ACATCATGCA TGGTAAGCTC
TGCGAATCCG AACAATTAAA TTTGGCTGAT TTTGATAACT TTATAAAGGC CAATAGTTTT
GCGCATTCAT TTTTTCAGCA CAGCATACCC TTTGTTTATT TGTTAAATTA CAGAACTGGT
TTATATGTCA ACATGTCTGA AAACTTTGCA GGGTATGAAT CCGGATGTTT TTTAAATGAA
GGCATCAATC ATACCTTACA AATACACCAA CGTGACCATT TGAGGCTGTT CAACCAGGAA
ATATTTCCGG ACAGACTGGA GTTTTTGAAA AGCATCCCCA CATCAACGCA TAAAGATTAT
GTGTTTTCAT ATAATACCGC AGTTAAAAAC AGGAAAGGTG AAGACGAACA TTATTTGCAA
CGCAATTCCT TTTTATCTGA TGAGGTGGGC AACCTCATAT ATAGCATGGG AATACTGATC
AATATAACCC ATTACAATGA TAAAAACACT GTTTTCCAAA CCATTGATAA AATTGATCCC
GAGGGGTTAA GCAGCTGCGA AACCATTTAT AAAAAGGCAT ATTTTATAAA TGAGGAAGAC
AGGTTTTTTT CTAAACGTGA AAAAGAAGTA TTGCTGTGGA TGGCTGAAGG CTTGAGCAGT
AAAATGATAG CAGAAAAAAT GTTTGTTAGT GAGCATACCA TCATCAGTCA CCGCCGCAAT
ATGCAGGATA AGACCAATAC GCCCAATGCC ACTGCTTTGA TAAGCTTTGC GCTAAAAAAA
TCGATCATAT AA
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| Protein sequence | MRIKNRPTWL DYLDIMHGKL CESEQLNLAD FDNFIKANSF AHSFFQHSIP FVYLLNYRTG
LYVNMSENFA GYESGCFLNE GINHTLQIHQ RDHLRLFNQE IFPDRLEFLK SIPTSTHKDY
VFSYNTAVKN RKGEDEHYLQ RNSFLSDEVG NLIYSMGILI NITHYNDKNT VFQTIDKIDP
EGLSSCETIY KKAYFINEED RFFSKREKEV LLWMAEGLSS KMIAEKMFVS EHTIISHRRN
MQDKTNTPNA TALISFALKK SII
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