| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3241 |
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| Symbol | |
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| ID | 8254360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3846772 |
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| End bp | 3847563 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644936894 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_003093498 |
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| Protein GI | 255533126 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.685317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0480343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGAA AAAACAAGCA AACCTGGCTA AGCTATCTGG AATCTGTCAA AAGCAATGTT
TATGATTCGG AAGAATTTCA GCTTACTGGT TTTGATGATT TTATAAATGC CAATGGATTT
GCACAATCTT TTTTCCGCCA TAGCGTGCCT TTTGTTTACC TGTTGGATTA CAGAACAGGG
TTGTACATTA ATATGTCGGA AAACTTCGCA GGATATAAAT CGGAGTGTTT TTTAAAAGAA
GGGGTCAGCC ATACCCTCGA GATCTATCAG CGGGATCATC TACAGCTTTT CAATAAAGAA
ATTTTTCCTG ACAGATTAAA TATCCTGCAA AATATACCAC CAGAAAATCA TAAAAATTAT
GTATTTTCTT ATAACTGGTG TGTAGAAAAC AGGAATGGAG CATCTGAAAA ACTCTTGCAG
CGAAGTTGCT TTTTATCTGA TAAATCAGGA AATCCAATGT TCAGTATGGG CATGCTGATC
AACATCAATA ATTTTGGTAA TGAATTGCCC ATTGTTCAGA CTGTAGATGA AATTAACATC
AATGGTACTG CTGCCCATCA AACCATCTAT AAAAAAGTTT ATCATTTAAA TGAAGAGGAT
AAACTATTGT CTAAGCGTGA AAAAGAAGTT TTATTGTGGA TGGCTGAAGG ACTGAGCAGT
AAACTGATTG CAGACAAGTT GTTTATCAGT GAACATACGG TAATCAATCA CCGAAGGAGC
ATGCAGGATA AAACAAATAC CCCTAATGCC GTTGCCCTGG TTAGCTTCTG CATCAAAAAT
GGATTGATAT AA
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| Protein sequence | MKGKNKQTWL SYLESVKSNV YDSEEFQLTG FDDFINANGF AQSFFRHSVP FVYLLDYRTG
LYINMSENFA GYKSECFLKE GVSHTLEIYQ RDHLQLFNKE IFPDRLNILQ NIPPENHKNY
VFSYNWCVEN RNGASEKLLQ RSCFLSDKSG NPMFSMGMLI NINNFGNELP IVQTVDEINI
NGTAAHQTIY KKVYHLNEED KLLSKREKEV LLWMAEGLSS KLIADKLFIS EHTVINHRRS
MQDKTNTPNA VALVSFCIKN GLI
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