Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3202 |
Symbol | |
ID | 8254321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3812488 |
End bp | 3812943 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936855 |
Product | UspA domain protein |
Protein accession | YP_003093459 |
Protein GI | 255533087 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.805747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0850987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA AAAAGATTTT AATTGCTGTT GATAACAGTA CATGCTCAGA AAAAGCCGCC AAAACAGGTT ATGAAGTAGC AAAAACCTTT GGAGCAGAGG TTGCACTGGT CAACATTATA GAACCTATAC CAGCTAATAT TAATCCCGAT CTGACACTTG CACCGGTTTT TTTAGAGGCT TACGACAACA GTGAAGAGAA TAGCCACGTT TTGCTAAAAG AAATAGAAAC GAAATTTGGA CAGGGTATCC CAACCACTTA TCTGAGTGTA ATCGACAGTG CTGCACATGG CATCATTAAA CAGTCGGACG AATGGGGATC TGACCTTATT GTGATCGGTA CCTATGGCCG TACTGGTATT TACCATTTCC TGATGGGTAG TGTGGCAGAA CACGTAGCCA GGAAGTCAGC CTGCCCGGTA TTAATTATAC CAAATAAATA TGAAGAAAAA GCCTGA
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Protein sequence | MNLKKILIAV DNSTCSEKAA KTGYEVAKTF GAEVALVNII EPIPANINPD LTLAPVFLEA YDNSEENSHV LLKEIETKFG QGIPTTYLSV IDSAAHGIIK QSDEWGSDLI VIGTYGRTGI YHFLMGSVAE HVARKSACPV LIIPNKYEEK A
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