Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3201 |
Symbol | |
ID | 8254320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3811599 |
End bp | 3812381 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936854 |
Product | NLP/P60 protein |
Protein accession | YP_003093458 |
Protein GI | 255533086 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.234486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.143067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAC AATACGGGAT TTGCAGGGTA GCAGTGGCAG CTTTAAGGGC CGAACCATCT GACAAGGCGG AGATAGCCTC ACAATTGTTA TTTGGCGATC AGGTGGAAAT ACTTGAACAA ACAGACAAAT GGCTTTTTAT AAGGAATGCT TATGATGGTT ATGAAGGCTG GGTAGATTTT AAACAGCTGG GTAGTTTAAG TGCGGAGCAA TACGCTGCGC GTCATTACTA CGATACATTG GTTCCGGCAC AACCTTTAAA TGTAATCACT GCTGCAGACG GGGGTAAATA CTACCTTTCA CCAGGTAGTG TATTGCCTGC TTATGAAAAT GGTTGTTGTT ATCTGGGAAA AGATAAATTT AATGTTTCCT TTTTGCCCCA GGGTCCGGAT GCCCAGGCTT CAACTGAGCG TATAAGTGCT ACAGCCCTGT TTTTTCAAAA TGTACCTTAT CAATGGGGTG GAAGAACCTT GTTTGGGATA GACTGTTCCG GTTTTGTGCA GACCGTATTT AAATTAAACG GTATTAAACT AAAAAGAGAT GCCTGGCAGC AGGCCGAACA AGGCTCAACC GTAGATTTTT TACCGGAAGT ACAGCCTGGT GACGTTGCAT TTTTTGACAA TACGGAAGGC AGGATTATTC ATGTTGGTAT CCTGCTCAAT GCAAATGAGA TTATACATGC CTCGGGTAAA GTTAAAATAG ATGCCATGGA TAGTGAAGGG ATTTACAGTG CCGAACTGGG CAGGTATACC CACAAGCTCA GAATCATTAA ACGCTTTATT TAA
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Protein sequence | MEQQYGICRV AVAALRAEPS DKAEIASQLL FGDQVEILEQ TDKWLFIRNA YDGYEGWVDF KQLGSLSAEQ YAARHYYDTL VPAQPLNVIT AADGGKYYLS PGSVLPAYEN GCCYLGKDKF NVSFLPQGPD AQASTERISA TALFFQNVPY QWGGRTLFGI DCSGFVQTVF KLNGIKLKRD AWQQAEQGST VDFLPEVQPG DVAFFDNTEG RIIHVGILLN ANEIIHASGK VKIDAMDSEG IYSAELGRYT HKLRIIKRFI
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