| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3171 |
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| Symbol | |
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| ID | 8254290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3773104 |
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| End bp | 3774843 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936824 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093428 |
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| Protein GI | 255533056 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.670451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ATATATATCT ACTGGCAATT TTACTTGGCC TGACAGCAGT ATTGCCTGGC
TGTTATAAGC TGGATGTGGC TCCTCAGGAT AAATTGAATA CCGATCTGTT CTGGAAAACC
CCTGCACAGG CCCGTCAGGG GATTGCAGCA GTTTATGCAG CCCTGAATTT AAGTCAGACT
TACAATAAGT TTTTTGGTAT GGATTGCCTT TCCGATATCG GCATTGGCTA TGATGATGCC
GGGTATGGAG AAATCAGTAA CGGCTCCTGG TCTTCCCGTA CCGGCTATGT AACAGACAGG
TGGTCTAACA GTTACGAGGG CGTTGCCAGA GCCAACAAAG CAATCAGAAG CATTGCTGCA
TCTTCACTCG ATGATGCATT GAAATCGCAG ATCACGGCAG AGGCGAAGTT TCTGCGCGCT
TTATTTTATA ATTTCCTGCT CACCCATTTT GACGGCGTCC CTTTGTATGA TGAAACTACC
GATTACGACA AAGATTACAT GGAGCTTAAA AAGCCAAGAG CAACTGCTCA GGAAACCAGG
AACTTTATTT TAAAGGATTT AACAGATGCC ATTAATGTAC TTCCTGCCAA ACAGGCCCCG
GCCGAGAATG GCAGGGCCAC TAAAGGTGCA GCTTATGCCC TCAGGGGAAA GGTTTATTTA
TACAATAAAC AATACGATCT GGCCGCTAAG GATTTTGAAG AAATTGTGCT TGATCCGAGT
GGTAAAGGTT ATGGATACCA GTTGTATCCA GACTATGCAG GCTTGTTTCT ACCAGGGGGA
GATGAGAGCA GTGAAATGAT CTTTGCCATC CAAACCTATT CTGAAGTGGG CTTTCTTGCT
GGTATGCCTT ATGCCCATTA TATGGGCTCC AATGCAACTT TAGGAACCAG CTGGAATAAT
GTGATGCCTT CTGTTGAGCT GGTGGACAGC TATGAGACCA AAGATGGCCA TCCTTTTAAC
TGGGACAATT ATATTCCAGG TTACAATGGC AGCAATACCG TTAGGGAAGA AACATTGAAG
GCTACCTTAT CTGCTGATTT TAAGACCGTA GCAGCTTATC CTAAAAACAA GGCCAAATTG
CTGGCCATGT ACGAAGACAG GGACCCGAGG ATGAAGCAGA CCATTATTTT GCCTTATACC
AATTACCTTG GCTTTATAGG TAATGCCAAT AAGATGACGG AGTTTGTTTA CAATCCAAAC
GTGGCTACTG TAAACGGCTT TATCGTCATC AACAGGTATA AAAGCAATTA TCTGTACCTG
TTCAGGAAAT TTGTACCTGA AGGAGATATG GGCGGCAAAT TACCACCGAA CAATAGGGAC
CATGTGCCTA TTAATTTTCC GATCATCAGA TATGCCGATG TATTGCTGAT GCTGGCCGAA
TGTTACAATG AGGCCGGAAA TATAAATGAT GCAGTAAAAT ACATCAATAT GGTACGTAAA
AGACCATCTA CCAATATGCC TGGTATCAAC AGCGGACCGG CCTGGCTTGA AGCAAGAGAC
CACGATGCTG TATTTAAGCG GATCATGCAG GAACGTGCAG TAGAGTTTCC TGCAGAGGGT
TTAAGGTATT ACGACCTCAT CAGGTGGAAA CTGGCAAAAG GTTTAATGAA CAAGGATGTA
AAGGATGCCT TAGGCAATAA GCTTTATACA GCCAAATTTG AGGATAGACA TTATTTGTGG
CCAATTCCTG GAGTTGAAAG AGACAGGAAC CCAAGTCTTG TTCCAAATTT AGGCTGGTAA
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| Protein sequence | MKKNIYLLAI LLGLTAVLPG CYKLDVAPQD KLNTDLFWKT PAQARQGIAA VYAALNLSQT
YNKFFGMDCL SDIGIGYDDA GYGEISNGSW SSRTGYVTDR WSNSYEGVAR ANKAIRSIAA
SSLDDALKSQ ITAEAKFLRA LFYNFLLTHF DGVPLYDETT DYDKDYMELK KPRATAQETR
NFILKDLTDA INVLPAKQAP AENGRATKGA AYALRGKVYL YNKQYDLAAK DFEEIVLDPS
GKGYGYQLYP DYAGLFLPGG DESSEMIFAI QTYSEVGFLA GMPYAHYMGS NATLGTSWNN
VMPSVELVDS YETKDGHPFN WDNYIPGYNG SNTVREETLK ATLSADFKTV AAYPKNKAKL
LAMYEDRDPR MKQTIILPYT NYLGFIGNAN KMTEFVYNPN VATVNGFIVI NRYKSNYLYL
FRKFVPEGDM GGKLPPNNRD HVPINFPIIR YADVLLMLAE CYNEAGNIND AVKYINMVRK
RPSTNMPGIN SGPAWLEARD HDAVFKRIMQ ERAVEFPAEG LRYYDLIRWK LAKGLMNKDV
KDALGNKLYT AKFEDRHYLW PIPGVERDRN PSLVPNLGW
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