Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3129 |
Symbol | |
ID | 8254247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3736930 |
End bp | 3738150 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936782 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003093387 |
Protein GI | 255533015 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCA TCAACCTTAT CAGATTAGCC ATTAAAGCAC TGCAACGCAA TAAACTACGT GCATTACTCA CCATGCTGGG AATTATTATA GGGGTAGCTT CGGTAATTAC CATGATGTCT ATCGGAGAGG GTTCCAAACA GAGCATTAAT GCTTCCCTGG CAAGTATGGG CTCTAATATG ATTACCATTA TGCCTTACAG CAATGTACCA GGTGGCGCAC GTATGATGGG CAACAGTTTT AAAACACTGA CCCTTAAAGA TGTAGAGGCA TTGAAAAAGA ATGCTGTTAA TATTGCAGAA ATTTCTCCGC TGGTCTCTTC AAGCGGACAA TCGATAAGTG GCCCCAACAA CTGGCCAACA AGCATCCAGG GTGTAAGCCC CGCATACCTT GACATCAGAA AACTTGTAGT GAAAGACGGT ATAATATTTT CCGACCAGGA CATCAGGTCT TCGGCTAAAG TATGCCTGCT TGGCAAAACA GTGATCGACA ATCTGTTTCC CAATGGGGAT GACCCGATCG GAAAGATCAT CAGATTTGGC AAAATCCCTT TCCAGGTCAT CGGCACCCTA GTACCAAAGG GCACCAGTAA TTTCGGTCAG GATCAGGACG ACATCATCAT AGCCCCTTAT ACCACTGTAC AGAAGAGGAT TACTTCCTCT ATTTACTTCA ATCAGATTTA CGCATCAGCC ACCAGCGAAG CTGCCTCTGA TGCCGCTGTA GCAGAAATAA CCAGCATTTT AAAAGACACA CATAGAATCA GGCCCGGTGA AGAAAATGAT TTTCAGGTAA GGACACAGGC TGAACTGATG ACCATGATGA ACTCGACCAG CAGCATGATG ACTGCCCTGT TAACCGCAGT TGCCAGTATT TCGCTGGTAA TTGGCGGAAT CGGTATCATG AACATCATGT ATGTTTCTGT AACCGAAAGG ACACGCGAAA TTGGGTTGAG GATGTCGATC GGGGCCAGGG GCATTGATAT TTTACTGCAA TTTTTAATTG AAGCCATAGT AATCAGTGTT ACAGGTGGCC TGATCGGGGT GCTGCTTGGC ATTTCTGCTG CCATAGCTGT TCCCGCCTGG TTGAACTGGC CAACTGTAAT TTCTGAATTT TCTATTGTGA TCTCCTTCCT GGTCTGTGCT TTAACAGGTA TATTTTTTGG TTATTACCCC GCACTTAAAG CATCCAAACT GGATCCGATT GAAGCGCTCA GGTATGAATA G
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Protein sequence | MKFINLIRLA IKALQRNKLR ALLTMLGIII GVASVITMMS IGEGSKQSIN ASLASMGSNM ITIMPYSNVP GGARMMGNSF KTLTLKDVEA LKKNAVNIAE ISPLVSSSGQ SISGPNNWPT SIQGVSPAYL DIRKLVVKDG IIFSDQDIRS SAKVCLLGKT VIDNLFPNGD DPIGKIIRFG KIPFQVIGTL VPKGTSNFGQ DQDDIIIAPY TTVQKRITSS IYFNQIYASA TSEAASDAAV AEITSILKDT HRIRPGEEND FQVRTQAELM TMMNSTSSMM TALLTAVASI SLVIGGIGIM NIMYVSVTER TREIGLRMSI GARGIDILLQ FLIEAIVISV TGGLIGVLLG ISAAIAVPAW LNWPTVISEF SIVISFLVCA LTGIFFGYYP ALKASKLDPI EALRYE
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