Gene Phep_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3031 
Symbol 
ID8254143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3622979 
End bp3623572 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content38% 
IMG OID644936680 
Productprotein of unknown function DUF502 
Protein accessionYP_003093291 
Protein GI255532919 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.21839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00579514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAG TTGGCAGGGC ATTACTGAAT TATCTGATCA AAGGATTGCT AATCGTACTT 
CCTATTGCAT TAAGCATTTT TATAGTAATA TGGGCTGTAA CTACGGTGGA CAGCTGGTTA
AACGTAAATA ATATTTTAGG TGTTGATCCC AAAACCGGTG CCAGCCGGAA CATACCTGGG
CTGGGACTTG CACTTGTAGT TTCACTAATA TTACTTGCCG GTATTTTTGT AACCTATTTT
GTTACGGAAC CTATGTATAA TTGGTTTCAA CGTTTACTGG ATAAAATACC ATTATTAAAA
TTTATTTATT CTTCTATTAA AGACCTTACC GAGGCATTTG TAGGAGACGA GAAAAAGTTT
AATAATCCTG TTCTGGTAGA AGTAGAAGGT GATTTAAAGC GGATCGGTTT TCTTACCCAG
AATGATCTGA AATCTATCAA TCTTCCCGGA GAGTCTATTG TGTACTTTCC TTTCTCTTAC
TCATTTGCCG GACAGGTTTA CGTAGTGAAA CATGAGAAAA TAAAACCTTT GAATATGAGT
GCTGCAGATG CCATGAAGTT GGTGGTATCT GGCGGCGTTA GCCATTTTGG GTGA
 
Protein sequence
MNKVGRALLN YLIKGLLIVL PIALSIFIVI WAVTTVDSWL NVNNILGVDP KTGASRNIPG 
LGLALVVSLI LLAGIFVTYF VTEPMYNWFQ RLLDKIPLLK FIYSSIKDLT EAFVGDEKKF
NNPVLVEVEG DLKRIGFLTQ NDLKSINLPG ESIVYFPFSY SFAGQVYVVK HEKIKPLNMS
AADAMKLVVS GGVSHFG