| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2810 |
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| Symbol | |
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| ID | 8253918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3326284 |
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| End bp | 3329430 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936456 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093071 |
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| Protein GI | 255532699 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.348829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTA AACTTTTACG AACATTAAAA GGGATAGTAC TGTTGTCCCT GCTTATTTGT
GCGTCTTCGT ATGCACAGGT ACAGAAAATC ACAGGTAAAG TTACTGACGG CATCGATGGC
GGGCCTATGC CTGGTGTAAA TGTCAGTATT AAAGGTAAAC CCAGTAATGT TTCCACAAAT
GCAAATGGTA TTTACACCAT CCAGGCCGAT CCAGCCACGG ATGCATTGGT GTTTTCTTAC
ATCGGATATA CCAGGCAAAC CATTAACCTA GTTGGGAAAA CCAGCTTGGA TGTTGCACTT
ACATCTGATA ATAAGTCACT CGAAGAAGTG GAAATCATTT CTGTAGGTTA TGGTACCAAG
AAACGATCGG AAATATTAGG CTCTGTAGCA ACAATTACGG GAGCGGAAGT GATGGATATT
CCAGCACCAA ATATTGCCGG TGCATTAAGA AACCGTATTG CGGGTGTTGG AGTGAGCCAG
GTTTCTGGTC GCCCGGGCTC GGCAATCACA TTAAATATCA GGAATTCTAC GGCTTCAGAA
ACAGTTGCGG GAGCCACAGC AGAACCTTTG TATATTATTG ACGGAATTAC GGTAGATAGA
AATGCTTTCG ACGCTGTGGA TCCTTCAATG GTTGAAAACA TTTCCTTTTT AAAAGATGCA
TCAGCCGCCA TTTATGGTGC TGCAGGTGCT AAAGGTGTTG TATTGGTTAC AACCAAAAGA
GGTAAAATCG GTAAGCCTAG CATCAGCTAT AATGGGTATG TAGGTGTATC TGATGCATCC
AGAACCCCAG AAATGTTAAG TGGTTTAGAA CATGCAACAT TATTGAACGA TACTTACAGA
CTTTACAATG CCTCAGAATC AGCTTTTTTT TCTCAGGCAG ATCTTGATTA TATTGCAGGA
ACCAATTATA AAAGCTGGTA CGATGAATTA TGGAAGTCTG CCACAACTCA GAGGCATAAT
TTAAGTATCT CTGGGGGAAG TGATAAGATC ACTTTTTTTG CTGGAGGCAG TTATCAGAAT
GAAAATGGTA ACTATGCCGG ACTAAAGGTT GATAAATATG GTTTCAGAAG CGGTTTGACG
GCCACTATCG TTGAGGGACT AAAAGCGGAT ATCGCTTTTA ACGTTGATCA TAACCTTAGA
AAAAGTCAAA ATACAGTTAG TGAAAACGAT GCCGGCTTTT TTGAATCTAT CATATCCGTG
CCAAGATGGG TACCCATAAG TATTAATGGA CTGCCTGTGA ATTTTAATAA TGGCTCACCA
CGCAATCCAT TAGGCGTGTT GCAATCCGGT TATTATGACG ATAGAAAAAC TCAATCTTAT
CGTGTTAATG CTAGTTTAAC TTATCAGCCT AAATTCTTAA AGGGTTTAAC TGCAAAGCTG
CAGGTATCAC AAGGTGGTGG AAATTCAGCT AGCACACAAT ATGATCCACC TTATAAATTG
TATAATTTCT TAAGGGTAGG AAATAATTCA GCAATTTATA GTGACCAACC AGATCCGGTA
ACACCTTTTT TTGAGGCGGT TACTGTTGCA AACTCCAAAG TGATGCCAGG TTTGAGCAAG
CAAAGCAGCT ATCAGGGCTT TTTTACCCTG CAATATGCTA AAACAATTGG TTTACATAGT
TTGGATATAA TTGCGGGTGG TGAACAAACA GAAGGTTCTT CTGAAGATCT GAGTGTGTAC
TGGAGAAATC AGCTCATACC GGAAGCAGAT GATTACTGGG CTTTTGATCC TAATACTTTA
ACACGTCAGA GCAGAAATAT CTTTCAGTCT ACAAAACGCT CTTTTTTTGG ACGTTTCAGT
TATGATTTTG ATAAGAAATA TCTCATCGAA GGAGTTGCTC GTTTAGATGC TTCATCAAAC
TTTGCTTCAG GAAACAGATG GGGATTGGCA CCTAGCATTG GTTTAGGTTG GGTAGTGAGT
AAAGAGAATT TTTTCAAAAA TAATGTATCC TTCGTGAATT TTCTTAAGTT GAAGTTTAAT
TATGGTATTG TTGGAGACGA TAGGGTTACA GAAAGATTAT GGCAGGAAAG ATACACGATA
GATGTATCAA ACGGGTACCT ATTTGGAAGT TATAACGGGA ATGGTCTGAA CCCGTCCGTA
TATCCGAATC CTGACATTAC CTGGGAAAAA AAGGAGACCA TAAATGTTGG TGTAGAAGCC
TCTCTTTTTG ACAGTAAACT GGATGTTGGG GTCGAGTTTT TCCGCAACCG GACATTTGAT
GGTTTTGACA GGGGAGCCAA TAACAGGTAT CCTTTATATG CCGGTTTCAC TGCACCAGTA
GTAAATTACC GCGAGGCCTA CAATTGGGGT TCTGAATTTA GCATTGGTTA CAGGGCAACA
TTAGCCAAGG ATTTAAAGTT AAGTACCAGT ATAAATTTTA GTTACGGAAA TTCTGTTGTT
GATAGAATGA TCTACGCCCC AGGTAACTTG CAGGAAAACA GACCAAATGA ATGGCTTGCC
CTTTCATTCG GAACGGATCC AAGGAAATAT AACAGCAGTA ACATTGGGCT GAAAACAATA
GGAATGTTCA GAACCCAGGG AGAAATAGAT GCCTTCCTGT TAAAAAATCC TAACTATACT
TTATATGGTA ACGTACCACA ACCAGGATGG CTGTACTACG AAGATGCCAA CGGCGATGGC
GTAGTTAATG ATCTGGATAT GGCACCGATG TTTGACAATA CGAACTCATA TTTTGCCTCA
GGTATTAATC TTAACTTATC TTATAAGGAT TTCAGCCTGA GCACCAATAT TCTTGCACGT
CTGGGTGGAA AGGTATTTTA TGACAGTCGT GCCCGTATTG CACCTTCCAA TACCAGAAAC
ATATTGAATA TCTGGCAAGA CCACTGGACA CCTGAAAACC CCATGGCAGG CAAGTATCCA
AGGTTTGATG ATCCCTCACT TACCAAAAAT TCTGATTTCT GGGCAGTTGA CGGAACCACT
ATCCGAGTAA ATAACATGAC TTTAAGCTAT AAACTGCCGG CTAAAATAGC AAATAGATTA
GGTTTGGGTG GCGCGCGGGT ACTGGCAACA GGTAATAACT TATGGACACT GGTAAATCCT
TTGAAATATA AAGATCCATA TACCTCAAGT GCGTATGATT ATCCAATATT AAGAACAATT
TCCTTAGGTC TAAGTGTAAA CTTATAA
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| Protein sequence | MNIKLLRTLK GIVLLSLLIC ASSYAQVQKI TGKVTDGIDG GPMPGVNVSI KGKPSNVSTN
ANGIYTIQAD PATDALVFSY IGYTRQTINL VGKTSLDVAL TSDNKSLEEV EIISVGYGTK
KRSEILGSVA TITGAEVMDI PAPNIAGALR NRIAGVGVSQ VSGRPGSAIT LNIRNSTASE
TVAGATAEPL YIIDGITVDR NAFDAVDPSM VENISFLKDA SAAIYGAAGA KGVVLVTTKR
GKIGKPSISY NGYVGVSDAS RTPEMLSGLE HATLLNDTYR LYNASESAFF SQADLDYIAG
TNYKSWYDEL WKSATTQRHN LSISGGSDKI TFFAGGSYQN ENGNYAGLKV DKYGFRSGLT
ATIVEGLKAD IAFNVDHNLR KSQNTVSEND AGFFESIISV PRWVPISING LPVNFNNGSP
RNPLGVLQSG YYDDRKTQSY RVNASLTYQP KFLKGLTAKL QVSQGGGNSA STQYDPPYKL
YNFLRVGNNS AIYSDQPDPV TPFFEAVTVA NSKVMPGLSK QSSYQGFFTL QYAKTIGLHS
LDIIAGGEQT EGSSEDLSVY WRNQLIPEAD DYWAFDPNTL TRQSRNIFQS TKRSFFGRFS
YDFDKKYLIE GVARLDASSN FASGNRWGLA PSIGLGWVVS KENFFKNNVS FVNFLKLKFN
YGIVGDDRVT ERLWQERYTI DVSNGYLFGS YNGNGLNPSV YPNPDITWEK KETINVGVEA
SLFDSKLDVG VEFFRNRTFD GFDRGANNRY PLYAGFTAPV VNYREAYNWG SEFSIGYRAT
LAKDLKLSTS INFSYGNSVV DRMIYAPGNL QENRPNEWLA LSFGTDPRKY NSSNIGLKTI
GMFRTQGEID AFLLKNPNYT LYGNVPQPGW LYYEDANGDG VVNDLDMAPM FDNTNSYFAS
GINLNLSYKD FSLSTNILAR LGGKVFYDSR ARIAPSNTRN ILNIWQDHWT PENPMAGKYP
RFDDPSLTKN SDFWAVDGTT IRVNNMTLSY KLPAKIANRL GLGGARVLAT GNNLWTLVNP
LKYKDPYTSS AYDYPILRTI SLGLSVNL
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