| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2722 |
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| Symbol | |
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| ID | 8253830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3208830 |
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| End bp | 3212249 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936370 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092985 |
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| Protein GI | 255532613 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.784353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA ATTATACTAG GAAACTTGGT ATACCTAGAC CCTTATGCCA TAAAATACTG
CTAATTATGC GACTAACCAC CGTAATATTA ATAGCATCCT TAATACAGGT CAGTGCAGCT
ACTTTTGGTC AGCGCGTTAC GTTAAACCAG CGGAACATAC CGCTTGAATC TGCATTGAAA
GAAATAAGGA GACAAAGTGG ATTTGACTTT TATTATGACG GTAAAGCCAT TTCAAAAACT
CAGAAAGTAG ATGTTTCCAT TACTAATGTA ACAGTTGCTG AAGCATTGAA ACATATTTTA
AACGGATTGA AACTCAACTA TCAGATTGAT GGAAAAACGG TTGTCATAAA GACAAACGAA
CCCTCTTTAA TAGACAATGT TGCCAATCTT TTTAATGCTG TTGATATCAG CGGAACTGTG
AAGGATGAGA AAGGAAGCCC TATTCCCGGC GTAGTGGTCA CCGCTAAAGG GAGCACTGTA
CGTACTGTTA CAGACAATGA GGGCAGATTT AAGTTAAGAG TAAATGATGT GAACGATATC
CTGATCTTTT CTTATATAGG TATGCAAACA CGGGAAGTTA GCGTTGGGGG AAATACGCGA
CTGGATATCG TATTGAAAGA AAATATCCAG AACCTGAGTG AAACAGTTGT AGTCGGATAT
GGAACTCAGA AAAGACAAAA CCTTACAGGT GCCATCTCTG TGATCGACAG CAAAATGCTG
ACAAACCGGC CGGTTACCAA TGCGATTGCT GCCCTGCAGG GTACTGCGCC GGGTTTAACT
GTTACCAGGG GTAGCGGGCA ACCTGGAAAG GAAGGATATG GGATACAAAT CCGTGGCCTT
TCATCGGTAA ATGGTAACAG TCCGCTGTAC ATTATTGATG GGGCACCGGG AACTTTGGCC
AACATCAATC CGGATGATAT TGAATCTATA TCAGTTCTTA AAGACGCGGC AGCTGCCGCA
ATTTATGGTG CCCGTGCCGC AGCAGGGGTT ATCCTGATTA CAACAAAGGC CGGTGTCAGC
GGTAAAACGA AGATCCAGTA CGGGAGCATT ATCGGTTTGC AGCGCCCTAC CCGGCTACCA
GAAAGGCTGC ATTCCTGGGA AGAAGCTGAA ATGGCCAACC TGTCACAGTC CAATGCAGGG
CTTACCTTGC TCTGGACAGA TGAGCAGCTG CAATGGATGC GAGATCCAGA TATCAATTAT
AAGATCAATC CAAGCAACCC TTCAGTATGG GATTTTTATT ATGACATCGA TCCCATCAAA
GAGGAGTTGA AGGATATTTC CCCGTCCCAG CAGCATAACC TGTCTCTTTC TGGCGGAACG
GATAAAAACC GCTATTTACT TTCCCTGGCC TATTTTAACC AGGAAGGAAT TTTTAAGCAC
AGTTCTACCG ATAAAACCAA TCGTTTTAAC GCACGTTTTA ATTATACTAC CCGGTTCAGC
AACAAACTGA GTGCGGATAT CCGCCTCTCT TATGTTAAAA CCCGGGTACT TACGCCTAAC
CGTGGTACGG ATGGCAATAA CTCCCTGTTG TATGATATAT ATCGGTTACG TACACTGTAC
CCAACCTATC TGCCAGAGAG CGATAATACC AAATATGCTA CCATCAGTGG TGACAATGTT
GGTGCATTGC TTAGAGAGGG AGGAAACAAT ATTGCCACCA ATCATTTTTT TGAACCTGTT
TTTACGCTTA AAGCCGATAG CCTGGTAAAG GGGCTCACAC TCCGTGCCAT TTATGCACCC
AGTCTGCTTA CCAACAACAA TACAGCCATC AGTCGCACCA TTCCATTGTA TAACAGGTTG
GGAATCAATA ATTACATGAA TAATCCCAAT GCCTATACTG ATGCCTACCA GATGCAGTCA
ACCAATAACG CCCAGTTACT GGCTGATTAT GACCTTAAGC TTGGTGACCG TCATACTTTC
CATGTATTGG GTGGTACGGC ATTTGAGGAT TACAATTATC GCCGTACCAC AGCCAATGCC
CGCGCCCTGG TGTCGAATGA TCTGTTTACC CTCGGATTGG GCGATCCTGC GCAGGCTACA
AATACCCAGG ATATCCAGAC CTGGGCACTG ATGTCCTATT TTGGACGCTT TAATTACAAT
TTTGACGAGC GCTTTCTTTT TGAATTTAAT ATGCGATATG ACGGAAGTTC AAAACTGGCA
CCTGAAAACA GATGGCAGCT ATTTCCCTCA GTATCGGCCG CCTGGCGTTT GAACAATGAA
AACTGGTTCA AAAATGCACT GCCATTTTTT GAGGAGTTCA AGGTCCGTGG ATCATGGGGG
CAGCTGGGTA ACTCAAATGG GGTAATTGGT AATTATGATT ATATCGGATT GATTGATAAA
GGCCCTGTTT ACCCTTTTAA CAACCAGATC AACAACTCCC TGTACCAGAA TAACCTAGCC
TCGCCTGTAA AAACCTGGGA GACCGTAGAA AGCAGCAATG TCGGTCTTAA CATAGGTATG
TTTAAAAACC GTCTGACCTT CTCGGGCGAT TATTATACCA AACTGAACAA AAACATGCTG
GCGCCTTTAC AGGTTTCGTC AACCATAGGG GTAACCCCCT CAACCTATAA CATTGCCAAA
CTGAAAACCT GGGGTTGGGA ATTGAGCCTG GGCTGGCAGG AAAGCATTGG TTCAAACCTG
CGTTACTGGG TCAACGGTAA CCTGGCCGAC GACCAGAACA AGATACTGGA GTATAACGGC
CAAAGCACTA TAGCGAGCGG AATCAATACC ATTATAGAGG GCATGCCTTA TAATTCGATT
TATGGATACA GGGCAAATGG CTATTTCAAT ACTGCACAGG AAGTCGCTGC ATCGGCCTTC
CAGAACTCCA GAACAGGTCC CGGAGACATT CGCTATATCG ACATCAACGG CGACAATGTC
ATCTCGGCCG GGCTGGGCCG TGTAAGTGAT CATGGCGATC TCGAATACCT TGGAAGTACA
CAGCCTCGCC TGGTATTCGG ACTTAACGGT GGATTTGAAT GGAAAGGACT GGATTTCTCC
TTCTTCTTTC AGGGGGTAGG AAAACGTGAT GTATTGCTGA ACTCTCATGT CATTGTTCCT
TTCACGGCCA GTTACCGTCA ACCCTGGAAG ATCCATCAGG ATTACTGGAC ACCCGAAAAT
ACCGATGCCC GTTTCCCAAG GCTGTATGCA AACGATACGC AGAACCTGTC CAATTCCACA
CATTGGCTGG CCAACAGTGC GTACATCCGC CTTAAAAATC TCCAGGTCGG ATATACACTG
CCTTCGTCAT GGACGCACAA GCTAAAGCTC GAAAAGGTAA GGGTTTATTT TACGGGACAG
GATCTATGGG AAAGTACCAA AATGTGGTAT CCGTATTACG ATCCGGAAAG TCCTTACTCG
GCAGATTATA TCTATCCTTT TTACCGTACC TACAGTTTTG GTCTGAATGT TAATTTTTAA
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| Protein sequence | MYKNYTRKLG IPRPLCHKIL LIMRLTTVIL IASLIQVSAA TFGQRVTLNQ RNIPLESALK
EIRRQSGFDF YYDGKAISKT QKVDVSITNV TVAEALKHIL NGLKLNYQID GKTVVIKTNE
PSLIDNVANL FNAVDISGTV KDEKGSPIPG VVVTAKGSTV RTVTDNEGRF KLRVNDVNDI
LIFSYIGMQT REVSVGGNTR LDIVLKENIQ NLSETVVVGY GTQKRQNLTG AISVIDSKML
TNRPVTNAIA ALQGTAPGLT VTRGSGQPGK EGYGIQIRGL SSVNGNSPLY IIDGAPGTLA
NINPDDIESI SVLKDAAAAA IYGARAAAGV ILITTKAGVS GKTKIQYGSI IGLQRPTRLP
ERLHSWEEAE MANLSQSNAG LTLLWTDEQL QWMRDPDINY KINPSNPSVW DFYYDIDPIK
EELKDISPSQ QHNLSLSGGT DKNRYLLSLA YFNQEGIFKH SSTDKTNRFN ARFNYTTRFS
NKLSADIRLS YVKTRVLTPN RGTDGNNSLL YDIYRLRTLY PTYLPESDNT KYATISGDNV
GALLREGGNN IATNHFFEPV FTLKADSLVK GLTLRAIYAP SLLTNNNTAI SRTIPLYNRL
GINNYMNNPN AYTDAYQMQS TNNAQLLADY DLKLGDRHTF HVLGGTAFED YNYRRTTANA
RALVSNDLFT LGLGDPAQAT NTQDIQTWAL MSYFGRFNYN FDERFLFEFN MRYDGSSKLA
PENRWQLFPS VSAAWRLNNE NWFKNALPFF EEFKVRGSWG QLGNSNGVIG NYDYIGLIDK
GPVYPFNNQI NNSLYQNNLA SPVKTWETVE SSNVGLNIGM FKNRLTFSGD YYTKLNKNML
APLQVSSTIG VTPSTYNIAK LKTWGWELSL GWQESIGSNL RYWVNGNLAD DQNKILEYNG
QSTIASGINT IIEGMPYNSI YGYRANGYFN TAQEVAASAF QNSRTGPGDI RYIDINGDNV
ISAGLGRVSD HGDLEYLGST QPRLVFGLNG GFEWKGLDFS FFFQGVGKRD VLLNSHVIVP
FTASYRQPWK IHQDYWTPEN TDARFPRLYA NDTQNLSNST HWLANSAYIR LKNLQVGYTL
PSSWTHKLKL EKVRVYFTGQ DLWESTKMWY PYYDPESPYS ADYIYPFYRT YSFGLNVNF
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