Gene Phep_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2707 
Symbol 
ID8253815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3179623 
End bp3181920 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content48% 
IMG OID644936355 
ProductTrehalose and maltose hydrolase (possible phosphorylase) 
Protein accessionYP_003092970 
Protein GI255532598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0712554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.489106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GATCTCTGCT CCAGTTAACG GTAATCCTGC TGCTATGTGG AAGCAGGCCG 
GGCAATGCCC AGGAAATTTA CGCCGGGCGA TATAAAGCTG TTTTTACTGC AGCGCCCCAA
AAGGTACCCA CTGCCAAAAT ACCCGATGGG CCACTGGCAG GAAACGGAGA TATTGGTTTA
ACCCTGGGGG GTAACCCGGA TAATTTATGC TTTTACCTGG GCAAAAACGA TTTCTGGCGT
GCCTATCCGG TTTATCCTGG CGGGGGCATT GCCCTGCCGG GATGGTTGGA ACTGAACATC
AGCGCCCTTA AGGGTGCTGA TTATTATGCA GAGCAGGTGC AGGACAAAGC TTTCATTAAA
GGGGAATTTA CCAAAAACGA CCTCAAGGTT ATTATGGACG CCTGGGTATC GGCTACTGCC
AATACCGTTG TGGCCAGCTT TACGGCCACT AAGGCCTGTA CGCTAAAAGC ATTATTAAAG
GCCACAAAAG GCAATACCTC GGTAAATACC TCTGGTACAA CGCAGGGGAT ACACTGGGTA
ACCCGCTCTT TCCAGAATAC GCCCTTGCTG GAATGGCCAT GCCATGTGGC TATGGCCTTA
AAAGTATTGG GTGCCGAACA GCAAAATGAT GGGAGCATAA CCTTAAAACC CAATCAAAAG
GTAACATTGG TGGTTACGAT ATACACCAAC CAGGATAATC CTGACTGGAA ACAAAAGGCC
ATTACAACAG CCCTGGCAAC TACCCAAAAT ACACTGGTAC AGCTCAGAGA ACAACACGAA
GCCTGGTGGA AAGATTTCTG GGGGCGCTCA AATGTCCGCA TTGGCGATCC ATTTATAGAA
AAATATTATT ACGCCTCCCA ATACCTCTTT GGGGCAACAT CCCGCGGCAA TAAATTTGCC
CCGGGCATCT GGGGGCCCTT TGTTACCCGC GATTCTTCGG CCTGGGGTGG CGATTATCAT
TTAAACTACA ATTACCAGGC GCCCTACTGG GCCGCCTATT CTTCCAATTA TATAGACCAG
ACCGATAATT TTGACCAGCC CCTGCTGGAT TATATGGAAA AAGGAAAAGC ACATGCCAAA
GCCTTGCTGG GCATGAAAGG CATTTATTAT CCCGTAGGGA TAGGCCCAAA AGGCCTGGTT
ACCACCCGGT GGCCACTTAC GCCCGATGAA ATGGAAAAAC GCTATGCCAC CCGCGAAAAT
ACCATCGATG GCGGCTATAA ATTCCTTGGA CAAAAAATCA ATGCTGTGTT TAGTGTGGGC
AATATGCTGA TGCGCTTTTA CAGTACCTAC GATAGGGCCT ATGCCCTCAA AATTTATCCA
TATGTATTGG AATGTGCCAA TTTCTGGGAA GATTACCTGA AATTTGAGAA TGGCCGTTAT
GTGATCTATA ATGACCATTA TGGCGAGGTG ATGCCCAACC TGCGCAACAA AGGGGTTTGG
CGCAATATGC TGGGCGATTT TAACTCGACA TTGTCCCTTG GCCTTGTAAA AATGCTGTTT
AAAGGGGTTG TCGACCTCAG TACTTTTTTA AATGCTGATG CCGGCAGGTT AGAAAAATGG
CAGCACATTG TAAAGCACCT TAGTGATTTT ACAGTGGCTG AAGTAAACGG GAAACTGAGT
TTAAAGAGTG TAGAAAAAAG CCCTTCGCCT TGGCACAGTG GCATCAATGG CCTGGCCAGG
GTTTCTATCC ATGGCCTCAT CCTTCCCGGA GGGGTTTGCG GCCCTGAAAC CGATTCGGCC
TTTAACCAGG TTTTATTAAA TGATGTAAGC CGCTGGAAAG AAAGGATGAA AGCTCCGGGC
GAATGGGCCA ATACCCTGGG CAATGGCATA GAAACCTGTT TTCCAGCCGC AGTAAGGGTG
GGTTATGATG CGGATGAAAT ATTAAAGCAG TTAAAGGATC GGATTACTGT GCAGTCGCTA
CCCAATCTCT GGATCACTGC TGAAGGCGGT GGTACAGAAA CCCTGGCCGC AGTGCCCCTT
ACTATAAATG AAATGCTGCT GCAAAGCTAT GAGCAGGTGA TCCGCATTTT TCCGAACTGG
AACAAGAATA AAGATGCCAG TTTCGACCAG TTGCGTGCTT ATGGTGCGTT TTTAGTGAGC
AGTAAGCAGG AAAAAGGAGA AATACTGTTC GTGAAAATGC GGAGTGAAGC CGGTCGTACT
TGTACCATCC GCAACCCATG GCCAGGCAAG GCCGTTCAAT TGTTCCGTAA CGGCCGGAAG
GCAGAAATAC TTACCGGTAA AACTTTTGCT TTTGGTACCA AAGCAGGGGA GAAACTGGAG
TTGCAGAAAG CCGGATAA
 
Protein sequence
MTTRSLLQLT VILLLCGSRP GNAQEIYAGR YKAVFTAAPQ KVPTAKIPDG PLAGNGDIGL 
TLGGNPDNLC FYLGKNDFWR AYPVYPGGGI ALPGWLELNI SALKGADYYA EQVQDKAFIK
GEFTKNDLKV IMDAWVSATA NTVVASFTAT KACTLKALLK ATKGNTSVNT SGTTQGIHWV
TRSFQNTPLL EWPCHVAMAL KVLGAEQQND GSITLKPNQK VTLVVTIYTN QDNPDWKQKA
ITTALATTQN TLVQLREQHE AWWKDFWGRS NVRIGDPFIE KYYYASQYLF GATSRGNKFA
PGIWGPFVTR DSSAWGGDYH LNYNYQAPYW AAYSSNYIDQ TDNFDQPLLD YMEKGKAHAK
ALLGMKGIYY PVGIGPKGLV TTRWPLTPDE MEKRYATREN TIDGGYKFLG QKINAVFSVG
NMLMRFYSTY DRAYALKIYP YVLECANFWE DYLKFENGRY VIYNDHYGEV MPNLRNKGVW
RNMLGDFNST LSLGLVKMLF KGVVDLSTFL NADAGRLEKW QHIVKHLSDF TVAEVNGKLS
LKSVEKSPSP WHSGINGLAR VSIHGLILPG GVCGPETDSA FNQVLLNDVS RWKERMKAPG
EWANTLGNGI ETCFPAAVRV GYDADEILKQ LKDRITVQSL PNLWITAEGG GTETLAAVPL
TINEMLLQSY EQVIRIFPNW NKNKDASFDQ LRAYGAFLVS SKQEKGEILF VKMRSEAGRT
CTIRNPWPGK AVQLFRNGRK AEILTGKTFA FGTKAGEKLE LQKAG