| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2667 |
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| Symbol | |
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| ID | 8253775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3120071 |
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| End bp | 3123352 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936315 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003092930 |
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| Protein GI | 255532558 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0190872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.932221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTCATGTATG TGAACCTCAT GCATCGTATT TAAGGCTCAA AACTAAAATA
ATAAGAACTA TGAAAGTTAC GGTGGTTTTA TTATGGATGG GAATGATGAC CACTTATGCA
AATACATACG CTCAGCTCCG GATGAATATA GATCTTATAA AAGGCAACTT ACCTGAGCTG
TTTCAACAAA TTCAGAAGCA AAGTGATTAT CTCATCATTT ATAAAGATGA TTTCATTAAA
TTAAATAAGT ATGAAGAGCT GAACCTGAAA CTAAACAACA AGACTGTTAA AGAAATTTTA
GATAAAGCAC TTAAGGATAG TGGTTTGTCG TATACCATTT CGGGGAGACA GATTGTTATC
GTTTCCAAAG AAAGGGGGGA GAGCAATATT GTTCAGGATA GTTTATTAAC CATTCGGGGG
CGTGTATATG ATACACATGA ACCACCAAGC GCACTACCAG GGGTAAGCAT CCGGATTAAA
GGCTCTACTA CCGGTACTTC GACAGATGGT GACGGCTATT TTACCATTCA GGCAAAGAAA
AACGATATAC TTGTTTTTTC TATGATCAGC TTTTTAAGCT ATGAATATAC CGTTTTAAAA
ACAGACCGAA GCCTTAATAT ATCATTGAAG GAGAATGTTT CGGCCCTCAA TGAGATTGTT
GTGGTTGGTT TAAATGAACA GCAGAAGAAG CATATAGCAA GTTCTGTTGC TTCATTAAAT
GTAAAATCGA ATATAGAAGG GAAACCGATC ACCACTTTGT CCCAGTCTTT ACAGGGAGGG
GTTACAGGTT TAAATGTAAC CCAGGCATCG GGCTTGCCCG GTGGTGACGC AGCAGCCATT
AAGATCCGTG GGATCAGTAC ATTAGGCAAT TCAGATCCAT TGGTGCTGGT GGATGGTATC
CCTATGGACA TGAACCATAT TGATCCGGTT ACTGTAGAGA GTGTTACAGT ATTGAAAGAT
GCTGCTGCTG CTTCAAGCTA TGGCTCAAGA GGTGCAAATG GGGTAATTGT TGTGACTACA
AAACGAGGGG TTGCAGGAAA GGTATCTGTA GTTTATGATG GTTATTATGG CGTGCAGCAT
GCATCGGCAT TGCCCAACAC CGTAGATGCA CCTACTTATA TGCGTATGTA CAATGAGGCC
AGCTATAATA ATAATCCTAC CAATGCTTTG CCATTTACGC AGGAACAGAT AGACAATACC
AGAAACGGAA TGGACCCGGT AGCAAATAAT GGTAAAGCTT TTGCCAATAC CAACTGGCTG
GATATGCTGA TTGATGATGC AGCACCTATT ACCAGTAACT CCATTTCTTT AAGCGGGGGA
AGCAGTGTTG CCCGTTTTGC ATTAACCGGA AATTATACGT ATCAAAAAGG GATCATTCCT
TTAAGTAATA TGAAACGCTT TAATATCCGT GCAAATACTA CGATCTCTTT GAGTGATAAG
TTTCAGGTGA ACCTGGATCT TCTTGCCATA AAAAGAGACA CCCAGCAGCC AAACAGGTTA
AGCGCAAGTG GAAATACAGG CAACAGGCTT TTAGAGGATA TGTACAGGGT TCCGCCTACA
ATAATCCCTA AGTTTCCAGT AAAGGATGGC CGTACTTTTT ACGGACAACA TGTGGATATC
GTAAATCCCT TGGCCTATAC AGAAGTTGGA GGTAAAAGAG CTGCTGAATT TGGACAGACC
AGTATCAATT TACAGCCAAA ATGGGAAATG TTTAAAAATT TTAACCTGAA AGGGCAGTTT
AGTTTCCGTT TGAACAGTGA TGTGACGCGG GATACCCGGG AGAATTTTAA CCATTTTGAT
TATTTTACAG GTAACCTGCT TAGAACATGG GCGCTGCAAA GAACTACTAC CATGGCAAGA
ACTACCTATT ATTATGCCGG ATTAACCGCA GACTATACCC TTAACCTAAA CGATCACAGG
ATATTTGCAT TGGCAGGTTA TTCACAGGAA GAAAATAATA GTGGTGCCTG GGATGTGTTT
TCTATTATGT CTGGCTATGC AAAACTGAAT TATTCTTATA AAGACCGGTA CCTGCTGGAA
GGTACTGTAC GTACAGATGG TTCTTCCCGT TTTGGGCCAG GTAATAAATT TGGTGTGTTC
CCTTCTGTAG CTTTGGGCTG GAACCTTCAC AATGAAAATT TCCTGAAGGA TAGCCGTTTG
ATCAATAACC TTAAAATCCG TGGATCTTAT GGTAAGCTCG GTAATGACAA TATAGGTTTA
TATCGTTACC AGACACTTAT TAACAACTCC AGTGGTGTGG AGACAACATA TGGTAATCCA
AACATTACCT GGGAGTCTGT AAATATGCTG GACATTGGAT TGGACCTGGG CCTGCTCAAA
AACAACAGAC TGGAACTAAC CTTTGACTAC TATGATAAGT TAACAAAAGA TATTATTCTG
TTACCTACAT TGCCACTTAT TGGTGGTTTT GAATCAGATG TTCCGGTTAA TGCAGGTGAA
GTAAAAAACA AAGGCTGGGA GCTATCGTTA AACTATAACG ACAGAATAGG GCAATATGTA
AATATATCAT TCAGACCTGG TCTTTCTTAT AATAAAAATG AAGTGCAAAA ACTTCAGGGT
GGTGATATTG TAACCACAAC TACTATTTCC AGAGTTGGTG GCCCAATTAA TGGTATTTTT
GGTTACAGAA CAGATGGCTT GCTGCAGGTT AGCGATTTTG ATGGTAGCGG TAACCCGCTG
ATACCCATTT TGTCAAATGC CAAGCCAGGC GATATCAAAT ATCTTGATGT GGATGGAGAT
AAAGTAATTG GCCTGGGCGA CCAGGGACTG ATCGGGAATC CTGTGCCACG TTTAAATTAT
TTTGCCAATT TCAGGGTAGC TTACAAGAAC TTTGATATTG AAGCCTTGTT GCAAGGTACG
GGGAAATCTG ATGCAGTATT GTATGGAATG TTTGCTTATC CGCTTGATTT CAGCGCTGAC
GGGGGTATTC CAACAACCTA TTATGCGAAT CATTACTGGA CGCCTGAGCG GACAGATGCA
CGTTTTCCAC GTTTAAACGT AACACCGGCC AATAATAAAG TTTCCTCTGA TTTTTGGTTT
CAGAACGGTG CTTATTTAAG GGTTAAATAT GTTCAGCTGG GTTATAACTT CAATACCCCT
TTTGTAAAAA AACTTGGCGT AAATTCTATC AGGGCCTATT TTAATGCTCA GAACCCGATA
ACTTTTACTT CAGTAAAGAT TACGGATCCG GAAAGCAGGG GGTACCAGTG GACTTATGGA
CTGGTTAAAT TATATACTAT AGGTTTCAGC GTTAAATTTT AG
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| Protein sequence | MKKLHVCEPH ASYLRLKTKI IRTMKVTVVL LWMGMMTTYA NTYAQLRMNI DLIKGNLPEL
FQQIQKQSDY LIIYKDDFIK LNKYEELNLK LNNKTVKEIL DKALKDSGLS YTISGRQIVI
VSKERGESNI VQDSLLTIRG RVYDTHEPPS ALPGVSIRIK GSTTGTSTDG DGYFTIQAKK
NDILVFSMIS FLSYEYTVLK TDRSLNISLK ENVSALNEIV VVGLNEQQKK HIASSVASLN
VKSNIEGKPI TTLSQSLQGG VTGLNVTQAS GLPGGDAAAI KIRGISTLGN SDPLVLVDGI
PMDMNHIDPV TVESVTVLKD AAAASSYGSR GANGVIVVTT KRGVAGKVSV VYDGYYGVQH
ASALPNTVDA PTYMRMYNEA SYNNNPTNAL PFTQEQIDNT RNGMDPVANN GKAFANTNWL
DMLIDDAAPI TSNSISLSGG SSVARFALTG NYTYQKGIIP LSNMKRFNIR ANTTISLSDK
FQVNLDLLAI KRDTQQPNRL SASGNTGNRL LEDMYRVPPT IIPKFPVKDG RTFYGQHVDI
VNPLAYTEVG GKRAAEFGQT SINLQPKWEM FKNFNLKGQF SFRLNSDVTR DTRENFNHFD
YFTGNLLRTW ALQRTTTMAR TTYYYAGLTA DYTLNLNDHR IFALAGYSQE ENNSGAWDVF
SIMSGYAKLN YSYKDRYLLE GTVRTDGSSR FGPGNKFGVF PSVALGWNLH NENFLKDSRL
INNLKIRGSY GKLGNDNIGL YRYQTLINNS SGVETTYGNP NITWESVNML DIGLDLGLLK
NNRLELTFDY YDKLTKDIIL LPTLPLIGGF ESDVPVNAGE VKNKGWELSL NYNDRIGQYV
NISFRPGLSY NKNEVQKLQG GDIVTTTTIS RVGGPINGIF GYRTDGLLQV SDFDGSGNPL
IPILSNAKPG DIKYLDVDGD KVIGLGDQGL IGNPVPRLNY FANFRVAYKN FDIEALLQGT
GKSDAVLYGM FAYPLDFSAD GGIPTTYYAN HYWTPERTDA RFPRLNVTPA NNKVSSDFWF
QNGAYLRVKY VQLGYNFNTP FVKKLGVNSI RAYFNAQNPI TFTSVKITDP ESRGYQWTYG
LVKLYTIGFS VKF
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