Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2606 |
Symbol | |
ID | 8253713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3052289 |
End bp | 3053662 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936256 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003092872 |
Protein GI | 255532500 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00170788 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA AATTAATTCT GGCTTTTGCG CTGTTCATCC AAACCTTAGA TGGGTTTACA CAGAATGTCA ACAAACCCCT TTTTCCCTCC GGTAGTAAGG TTTGTTTTGT AGGGAACAGC ATTACCAATA ACGGGGAATA TTACAATGAT CTGTGGATGT ATTATGCCAC ACGGTTCCCG AATACGCAAA TACGCTTTTA CAATTGTGGA ATATCGGGCG ATGTTGCCGG TGGAATCTTA AAAAGGATGG ACCGGGATAT CCTGTCCCAT CAGCCAACAC ATGTGGTAAT GATGATTGGA ATGAACGATG TGAAACGTGA TCTTTATGGA AAAAACCAGG CCAGCAATAC CTTGAAGGAA AAGGCATTGG CCGAATACAA TGACAATACT GATGCTGCAG TCGGTATTTT AAAAAAGCGG GTTGGCAATG TTATCCTCCT TCAGCCTTCA ATTTATGATC AGACGGCAGT TATAGAAACA GAAAACCTGT ATGGTGTTAA CGATGCCCTG CAGCGTTGTG CCCGGCAAAT GCGGGTTCTG TCAGAAAAGT ACCATACCGG ATTGGTAGAT TTTCAAACCA TTCTGCTCCG CATTAATAAA GAAGAGCAGC TAAAAGACCC TGCTTTTACC ATCATCGGTA AAGACAGGGT ACACCCCTTA TCTGCAGGTC ACTTTGTAAT GACCTACCAG TTCCTTAAAG ACACGAAAGC ACCTCAATAT GTATCAAAGC TTGTGATCGA AAATAGTCTG GCGGCTTCTC AAAAAAATAG CTTTAATGCA GAAATAAAAA AACAATCCAG TAAAAACAAC CGCTTAACTT TTGAATGTAT TGAAAAAAGT CTACCCTGTC CGGTTAAAGA ATCCGCAAAA AAAGCGCTCA GCTGGATACC TTTTAACGAA GAGTTTAACA CAGAGTTGCT GCAGGTAAAA CACTTAACAC CTGGAAGCTA TAATCTTTTT ATTGACGACG CTTTGATAGC AACTTTCAGT GCAGAAGCCC TTTCGACAGG AATTAACCTT GCCGTTTACC AAAACACACC CCAATACCAG CAGGCCATGA AAGTAATGGA TGCCTGCTTA AAATACCGGG ATACGGAAGC AGTGATACGC AATCTTAGGT TTGTTGAATT TACGCAGCTG TCCGGCCTTA AAGATCAATC TGATCTGAAT GTAGTAGAAC AATACCTTGT TAAAAGATTG GAAACTTTAA AAGATGGCGG GCATTATGAA TATTACCAGA AACAATTTAA GAACTACATT TTAAAGAAGG GCGCTGAGGC AGAAACCTTA AAAAAATTAC CCTTACTTGC TGCCACTATT TACCAGGTAA ACCAGCCAAA GCCACATCTT TTTAAAATTG AGAAACAACC CTAA
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Protein sequence | MKFKLILAFA LFIQTLDGFT QNVNKPLFPS GSKVCFVGNS ITNNGEYYND LWMYYATRFP NTQIRFYNCG ISGDVAGGIL KRMDRDILSH QPTHVVMMIG MNDVKRDLYG KNQASNTLKE KALAEYNDNT DAAVGILKKR VGNVILLQPS IYDQTAVIET ENLYGVNDAL QRCARQMRVL SEKYHTGLVD FQTILLRINK EEQLKDPAFT IIGKDRVHPL SAGHFVMTYQ FLKDTKAPQY VSKLVIENSL AASQKNSFNA EIKKQSSKNN RLTFECIEKS LPCPVKESAK KALSWIPFNE EFNTELLQVK HLTPGSYNLF IDDALIATFS AEALSTGINL AVYQNTPQYQ QAMKVMDACL KYRDTEAVIR NLRFVEFTQL SGLKDQSDLN VVEQYLVKRL ETLKDGGHYE YYQKQFKNYI LKKGAEAETL KKLPLLAATI YQVNQPKPHL FKIEKQP
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