| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2603 |
|---|
| Symbol | |
|---|
| ID | 8253710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3045063 |
|---|
| End bp | 3046976 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644936253 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092869 |
|---|
| Protein GI | 255532497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT TCAGAAATAT CTTATTTTTT ATAGTCCTTA TAGGAGGAAG TATAGCAAAG
GGGCAGAATC TTGCTGTTTA TGACAATTCA AAACCTGTTG TATTGCTGCA ACCATTGGAT
ATGCTTAGGG TTAAACAAAT CGAAGCGATG TTACCCGAAA AACCTTCTGG ATTTGGCGAG
ACCTATAAAA ACCGCAAAGA ATGGAACAGA CTGCTGAACA CCAGGAAATA CGACAAATTG
CTTAAAAGTG CCGACAGCTC ATTGACGGAG CCCTTTCCGG CCTGGAGCGA TACGGATTAC
CTTGCCTACT GGACTAAAGG AACTTCTGTA CCGGGAAAAA ACATGCTCCA AAAGCGCCTG
CTCTGGTTAA CCCGATATGT ATTTGCAGAA TGTCTTACCG ATCAGGGAAA ATATACAAAG
GCTGCAGAAG ATGCCATACT TGAACTGTGC CGGCAGAAAT CATGGGTAAA TCCGACACAT
GATTACAATA AGGTAAATTT TGAAGGCAAA AAATACCTGG TAGAGTTGTC GGCAGTAAGT
TATGCCCACC ATATTGCACA GGCATTATAT TTATTGGGTG ACAAGCTCGG CCCAAAGGTT
AAAGATGAGG CCATCAAGGC TTTACGCCTA AGGGTATTCG ACCCTGTGTT AAACTCAGTG
GCCACCGGCA ATAGCGAAAA TTTCTTTTTA ACCAATACAA ATAACTTTAA TGCAGTCTGT
CTGTCCGGAA CAGTGGGTGC TGCTGAAACC ATCCTCGATG ATAAAAGAGA ACGGGCCAAA
TTTATTGCCA TTGCAGAACG CTACCATAAA AATGGTGTGC ACGGGTTTTT GCCCGACGGC
TATTGTACCG AAGGTCTGGG TTATTACAAT TACGGTTTTG GCCATTTCGT ACTTTTACGT
GAAACGGTAT ACAGAAGCAC CGGAGGCCAG ATAGACCTGT TTGCAGATCC AAAAGTTAAA
CTTATTGCTG AATTTCTTCC TAAAACAGTA ATTATCCATG GTGTTTTCCC TTCAATTGGC
GACTGCCGGC CTTATACCCA ACCTTCTGCT TTCATTTTAT ATTATGTGAA CCGGAACCTG
GGTGTAGATG TATCGGACTT TAAAAAGACG GCTTTTGAAG GCCGTTCTAC TGAGCTTGCA
GAAAGTATCC TGGCAGTTTT TCCGGAAAAA ATATCTTCTG AACAGATAAT GGTAAAAAGC
AAGGGCAATG AACTAAGGTC TTATTTTGAC CAGGCTGGTG TACTCACTGT ACGCCCCGGC
AAAAACTCAG CCATGGATAT GGGCGTTGCC ATTAAAGGGG GCAACAACAA TGAGCACCAC
AACCACAATG ACATTGGCTC TTTTTCTATA GTAGTTGGGG ATGAAGTTTT GATGGGCGAT
CCGGGTATTA TACCCTATAC TTCCAAAACT TTTGGTCCCG AAAGGTATAC CTATAAAACC
ATCGCTTCCT ATGGGCATCC TGTACCTCTC ATTGCAGGTA AAGAACAAAT TCCTGGTGCA
GCCGCACAAG CCAATGTCAT CAGCACCAGC TTTAACAATG ACCAGGATAA ACTGCTGATG
GACATTGCCT CTGCATATCC GGTAAAGGAA CTGAAAAAGC TTGAACGGGA ATTCACCTAT
AACCGCAAAC CAAATGGTTT TCTGACAGTT AAAGACAATT TTAGTTTTAG CAATACCCAA
ACCTATGAAA CAGCTTTAAT AACCAGGGGT AAATGGAAGC AGGTCGGTCC CGGAGCAATT
GAAATCACAG GCAAAAAAGA TAAACTACTG GTTACAATAG AAAGTCAGGA TGGGTTTGAA
ATCAAAAGTG AAGAGCTGTC TGAAGGTGGC CTTCCTTATA CGCGTCTAGC CATCCGGCTC
AACAAACCTG TTCAGGAGGG TACCATTTCA ATGGTCTTTA AACCAATCAG ATAA
|
|---|
| Protein sequence | MKLFRNILFF IVLIGGSIAK GQNLAVYDNS KPVVLLQPLD MLRVKQIEAM LPEKPSGFGE
TYKNRKEWNR LLNTRKYDKL LKSADSSLTE PFPAWSDTDY LAYWTKGTSV PGKNMLQKRL
LWLTRYVFAE CLTDQGKYTK AAEDAILELC RQKSWVNPTH DYNKVNFEGK KYLVELSAVS
YAHHIAQALY LLGDKLGPKV KDEAIKALRL RVFDPVLNSV ATGNSENFFL TNTNNFNAVC
LSGTVGAAET ILDDKRERAK FIAIAERYHK NGVHGFLPDG YCTEGLGYYN YGFGHFVLLR
ETVYRSTGGQ IDLFADPKVK LIAEFLPKTV IIHGVFPSIG DCRPYTQPSA FILYYVNRNL
GVDVSDFKKT AFEGRSTELA ESILAVFPEK ISSEQIMVKS KGNELRSYFD QAGVLTVRPG
KNSAMDMGVA IKGGNNNEHH NHNDIGSFSI VVGDEVLMGD PGIIPYTSKT FGPERYTYKT
IASYGHPVPL IAGKEQIPGA AAQANVISTS FNNDQDKLLM DIASAYPVKE LKKLEREFTY
NRKPNGFLTV KDNFSFSNTQ TYETALITRG KWKQVGPGAI EITGKKDKLL VTIESQDGFE
IKSEELSEGG LPYTRLAIRL NKPVQEGTIS MVFKPIR
|
|---|
| |