Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2555 |
Symbol | |
ID | 8253662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2973438 |
End bp | 2976602 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936205 |
Product | hypothetical protein |
Protein accession | YP_003092821 |
Protein GI | 255532449 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.291539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTA AAACTTTAAC AGCAATTGTT TTCATTAGCG CCCTGGTCCT TATACTTGGT TTTCAACTGG GGGGCAGGAA ATTAAAGGCT GATGGTTTTG AGGTATTGAA AAAAGCCTTC AAAAATCCTG GTAATGAATA TGGCACCACC CCATTCTGGG TTTGGAACAC TAAGGTAAGC GGGGAAATGA TAGATTCTAT GATGCTGGAC TATAAGAAAA ATGATTTCGG AGGAGTAATC GTCCACGCCC GGCCCGGACT GATCACTGAA TATTTATCTG ATGAATGGTT CAGTTTATTT GAATATGCCC AGCAAAAGGG AAAACAATTG GGTCTGAAGG TCTGGATTTA TGATGAAAAT TCTTATCCTA CCGGGTTTGG GGGTGGTTTG GTGCCCGACC AGATGCCGGA ATCGTACAAT CAGGGCCAAA TGCTATATAT GAGTGAAGTA ACAGCTATTC CGGGTAATCT GGAAGAGGTT TTAATAGTCC TTAGAGAAGA CAAGGGACAG TTTACGGACA TAAGTTTAAG CCTGGCCGCA GAGAAGGGTA AAGCAGGGAA ATACCGGATT TTCAAAAAAG TGAATTATCA AAAGTCTAAC CGTGGAACGG TGGCAGGGCC TATTGGCTCT TCTTACGTAG ACCTGATGGC CAAAGGCGTT ACACAAAAGT TTATGGACAT TACCTTTAAA GGATATGAAA AAGTTGCAGG CCATGAATTT GGCAAAACTG TTCCGGGTAT CTTTTCTGAT GAACCAACCA TTATCAATGA GGGTAAGGAT TGTGTACGCT GGACACCCGA CCTGTTTGCG CATTTCAAGG AAAAATGGGG TTATGACCTG CGTCTTCAGC TGCCATCGCT ATTTGAGGAA ACCGGTAACT GGAAAAAAGT AAGACACAAC TATTACCAAA CGCTGTTGCA ACTGTTTATC GACAGATGGT CTAAACCTAT GTTTAATTAT ACCGAGCAGC ACAACCTGAT CTGGACGGGG CATTACTGGG AACACGGCTG GCCAAGCCCT TACCATGGGC CCGACAATAT GACCATGTAT GCCTGGCACC AGATGCCTGG AATTGACATG CTGTTTAACC AGTACAATGA AGATAAACCC GTACAGTTTG GAAACATCAG GGCGGTTAAA GAACTGGGTA GTGTAGCCAA TCAACTTGGA AAAAAAAGAA CGCTTTCCGA AACCTATGGT GGTGGCGGCT GGGAGCTGAC TTTTAAGGAC ATGAAGCGGT TGGGCGACTG GGAGTTTGTG CTTGGCGTGA ATTTTATGAA CCAGCACCTG TCGTTCATGA GTATTACCGG AGCAAGAAAA TACGATTATC CGCCGAGTTT TTCTTATCAT GAGCCCTGGT GGCCTTTCTA TAAAACGCTG AACCAATATT TTTCCCGGTT GTCGCTCTGC CTGTCAACGG GCCAGCAAAA AAATGATGTA CTGGTTTTGG AACCCACTAC TTCTGCATGG ATGTATTATT TCAGAGGTAA AGAGAACAAA CGGTTTTTTG AAATCGGGAA AAATTTTAAT GATTTTGTAA CTACCCTGCA AAGGGCGCAT GTTGAATATG ACCTGGGTTG CGAGAACATT ATCAAAGATC AGGGAAAGAT TGAAAGCGGA AAATTCGTTA TCGGCCAGCG TGCTTACAGT ACCGTTGTCA TTCCACCTGG TATGGACAAT ATTGACCGCC CTACATTTAA TTTATTGAAA GAATATGCCC GTCAGGGCGG CAAAGTGATC TTATTTGAAA AGCTTAGCTG TTTAGATGGG GATGCCAATG ACGCACTGGA TTTTTTTACA GCTGCTAAAA GCAATGTTTT GCTGGCTGTT GGTGCCGCTG AACAACAGAT CATCCAAAAT CATTTGCTGC CTGCAGACAT CCGGATATCG GCTGTAGGCA ATAATAGGAT AGGTGGTAAT TTGTATTACC AACGCAGACA ATTGGCTGAC GGGCAATTGA TTTTCCTTTC AAATGCGAGT ATGGAGGCCG CTTCAAAAGG TATGGTTACG GTTAATGGTA AAGACGCATT GATGATGGAC CTGTTCAGTG GGGGGATTTA TGATTATCCG GAAAAAGAAA GCTCCGGTAA GCTTAGTTTT AAATTTGATA TTCCAGCAGC GGGAAGCATG ATGTTTTTTG TGGCCGATAA GAAACAAACG GGTTTCAAAG CACCTGCTTT AAATCGGGCT GAAACACTTG TAAAAACAAG CCAGTCAAAA GTACTTCGCC CCGCAGAAAA TACGCTAATG ATTGACTTTT GTGACCTGGA ACTCAAAAAA CCCGATACCG CTTATCGGGA CTTGCATGTT GGCATCGCTT CTAATACAGC TTTTAAACAT TTTGGATTTA AAGATGGTGT AGGCAATCCA TGGAATAACC GTACCCAGTT TAAAGATCGG ATTGTTGCCC GCGACACTTT TTCGGTAGGT ACCGGATATA TGGCGACCTA CCGTTTTGAA ATAGCCCAAA ATGTTAACCT GAAAAATTTT CGTGCAGTAG TAGAACAACC AGGCTTGTGG AATAGTGTGT CTGTAAACGG AACAAAGGTA AAGGCTTTGA AAGGTAAATG GTGGCTTGAC CGTTCTTTTG GGGTTTTTGA AATTGGCAAT TACCTTAAGC CGGGTAAAAA CAGTATTTCA CTGGCTGTTT CGCCAATGCG TGTTTATGCA GAAATAGAAC CTGTATATAT ATTGGGCGAC TTTAACCTTG TTCCGGCAGT AAAGGGCTGG GAAATAACTG CAGCTGCACC GCTTACATTT GGACCCTGGA ATAAACAGGG GCTGCCGTTA TATGGACAGG GTATCAGCTA TGTAAAGGAG TTTCAGGTTC AGACCATGGG CAAGGAATAT GCCGTTAAAC TGAAAAAGTG GAAAGGCACA GTGGCTGCAG TAAAAGTTAA CCATGTGCTT GCAGGAATTA TCAGTTCGGA ACCTGATGAA CTTAATATTA CCCCTTATCT TAAAAAAGGC CTTAACCATG TTGAAATTGA GGTGATTGGA AGTCTTAAGA ATTTACTTGG CCCACATCAC AATAAACCCT TACCTGGTTT GGTAGATCCC GGCAAATGGT ATAATGTTAA AACATACCCT TCAGGAAATG ATTATCAGAC TTATGGTTAT GGTTTGGAAG AAGATTTTGA TATTCATGAG ATCATCCCCC GATAA
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Protein sequence | MKFKTLTAIV FISALVLILG FQLGGRKLKA DGFEVLKKAF KNPGNEYGTT PFWVWNTKVS GEMIDSMMLD YKKNDFGGVI VHARPGLITE YLSDEWFSLF EYAQQKGKQL GLKVWIYDEN SYPTGFGGGL VPDQMPESYN QGQMLYMSEV TAIPGNLEEV LIVLREDKGQ FTDISLSLAA EKGKAGKYRI FKKVNYQKSN RGTVAGPIGS SYVDLMAKGV TQKFMDITFK GYEKVAGHEF GKTVPGIFSD EPTIINEGKD CVRWTPDLFA HFKEKWGYDL RLQLPSLFEE TGNWKKVRHN YYQTLLQLFI DRWSKPMFNY TEQHNLIWTG HYWEHGWPSP YHGPDNMTMY AWHQMPGIDM LFNQYNEDKP VQFGNIRAVK ELGSVANQLG KKRTLSETYG GGGWELTFKD MKRLGDWEFV LGVNFMNQHL SFMSITGARK YDYPPSFSYH EPWWPFYKTL NQYFSRLSLC LSTGQQKNDV LVLEPTTSAW MYYFRGKENK RFFEIGKNFN DFVTTLQRAH VEYDLGCENI IKDQGKIESG KFVIGQRAYS TVVIPPGMDN IDRPTFNLLK EYARQGGKVI LFEKLSCLDG DANDALDFFT AAKSNVLLAV GAAEQQIIQN HLLPADIRIS AVGNNRIGGN LYYQRRQLAD GQLIFLSNAS MEAASKGMVT VNGKDALMMD LFSGGIYDYP EKESSGKLSF KFDIPAAGSM MFFVADKKQT GFKAPALNRA ETLVKTSQSK VLRPAENTLM IDFCDLELKK PDTAYRDLHV GIASNTAFKH FGFKDGVGNP WNNRTQFKDR IVARDTFSVG TGYMATYRFE IAQNVNLKNF RAVVEQPGLW NSVSVNGTKV KALKGKWWLD RSFGVFEIGN YLKPGKNSIS LAVSPMRVYA EIEPVYILGD FNLVPAVKGW EITAAAPLTF GPWNKQGLPL YGQGISYVKE FQVQTMGKEY AVKLKKWKGT VAAVKVNHVL AGIISSEPDE LNITPYLKKG LNHVEIEVIG SLKNLLGPHH NKPLPGLVDP GKWYNVKTYP SGNDYQTYGY GLEEDFDIHE IIPR
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