Gene Phep_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2541 
Symbol 
ID8253648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2955297 
End bp2955713 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content45% 
IMG OID644936191 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003092807 
Protein GI255532435 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0533623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTGGA TCTATGCTTT ATTGTCGGCT ATTTTTGCGG CCCTTACGGC TGTTCTTGCT 
AAAGTAGGGA TCAAAGGTAT TGATTCCAAC CTGGCAACGG CAATCAGAAC GGTTGTCATT
TTACTTTTAG CCTGGGCAAT TGTATTTTTC AGGAATGACC AGCAGGGCAT TTCCGGATTA
ACACGACAAA ACTGGACCTT TCTGATCCTT TCGGGCCTTG CCACGGGTCT ATCCTGGGTA
TTTTATTTTA AGGCACTTCA ATTGGGTAAG GTTTCGCAGG TTGCCCCGGT TGATAAGGCC
AGTGTGGCCA TTGCCATTGT GTTATCTGTT ATATTTTTAG GTGAACCCCT GTCCCTCAAA
ACCGCAGTTG CCGTATTGAT GATCATAGGT GGCACCATTA TCCTTATCTT TCAATAA
 
Protein sequence
MWWIYALLSA IFAALTAVLA KVGIKGIDSN LATAIRTVVI LLLAWAIVFF RNDQQGISGL 
TRQNWTFLIL SGLATGLSWV FYFKALQLGK VSQVAPVDKA SVAIAIVLSV IFLGEPLSLK
TAVAVLMIIG GTIILIFQ