Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2495 |
Symbol | |
ID | 8253602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2895105 |
End bp | 2895746 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936145 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_003092761 |
Protein GI | 255532389 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.115315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CATTCACCTG CATCATACTG CTGTCCTTAA GCTTGTATGG CTGTAAAGAT AAAGCGCAGC AGCTCCCTTT CATGCAAATG GAAGTAGGCG AAAAGGTAAT GGATGGTAAA ACGGTAAAGG ATACGGTTTT CCGGACCATT CCGCCTTTCA GGCTGCTAAA CCAGGACAGT GCAGTGGTTA CAGAAAATGA TTTTAAAGGC TGTATTTACG TGGCCGATTT TTTCTTCACT TCCTGCCCAA CCATTTGTCC AACCATGCAC CGCAACCTGT TAAAGGTCTA TAATAAGTAC CTGGGTAACC CCCAGGTTAA ACTGGCTTCG CATACCATCG ATGTGAAATA CGATACCCCA TCCAGGATGA AAGCTTATGC CGCTAAACTG GGGGTAAAAG GAACCCAGTG GGAATATCTA TGGGGCAGCA GGGATGAAAT CTATGCCCTG GCCGAACGAA ATTACCTGGT CTCCGCTCAA GAGGATAAAG CTGCGCCTGG TGGTTTTATC CATCAGGGCT ACCTGGTACT GGTAGATAAA GAAAAACGCA TCCGTGGTTT CTATGATGGC ACACAGGATA AGGAAGTACA ACAGCTGATG CTGGATATGG ATATATTACT GGCCTCGTAT TCCCAAAAGT AA
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Protein sequence | MRKTFTCIIL LSLSLYGCKD KAQQLPFMQM EVGEKVMDGK TVKDTVFRTI PPFRLLNQDS AVVTENDFKG CIYVADFFFT SCPTICPTMH RNLLKVYNKY LGNPQVKLAS HTIDVKYDTP SRMKAYAAKL GVKGTQWEYL WGSRDEIYAL AERNYLVSAQ EDKAAPGGFI HQGYLVLVDK EKRIRGFYDG TQDKEVQQLM LDMDILLASY SQK
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