Gene Phep_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2344 
Symbol 
ID8253450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2734817 
End bp2736253 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content44% 
IMG OID644935993 
Producthypothetical protein 
Protein accessionYP_003092610 
Protein GI255532238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.164766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA ATAATATATT TTCGATCTTT ATCCTGCTTG TGAGCATTGC AGCTATCAAT 
ACAGGATGTA AAAAGTATTT TGATCAGAAC GAAAACCCTA ATCTGGTGCA AAACCCTCCG
ATCAATGCCA TGCTTTCTAC AGCAACGCAA AAGGCCGCTT TAAATACACA GCGCTTTGCC
AGCTTTAACA ATTATTATGC GCAGTACCTG GCCAGCCCCT CAGCAAATGG TGCAACTGAT
ACCTATCAGA TCACAGATAA TACCACACAA TGGAACAATG CTTATTATGC GATGGCCGAT
CTGGCTGATA TGATTGGTAA GGCCCAGGCT GCCGGTGCTA CAGAGCACTT AGGTGTGGCG
CAGTTACTGA TGGCTTACAC GCTGGGCCTG GTTGCCGATA CCTGGGGCAG CGCTCCGTAT
ACTGATGCTT TTGCTACAAG CGGTTCGCTT ACCCCTAAAT ACGATTCGGA AGAAGCTTTG
TACCAAACCT CTCTTAACCT GATCAATGAA AGTATAAACA ACCTGAAATT GACTACTGCT
ACGATAAAAC TAGATGCTAC TTCAGATCTG ATCCATGCGG GTGTAAGGGC AGACTGGTTA
AGAACTGCCT ACGGAATACA AGCCAGATTT TTGAACAAAA TATCGAAAAA ATCAACTTAT
AATGCTGCAG CGGTATTGAC GGCAGTTGAC AATTCCTATC TTCCGGCTAC GAAGGAAGCG
TCTATGGCAG TATTCAGTGG AGTTAACCCA TGGGCACAGG TAGCGATAAA TAATGCGGGT
AATTTATTGG ATGGCTGGTT GTCTGAGAAC TTTGTTAACC ATATGAACGG GACAACTTAC
GGTTTATTTG ATCCTCGTCT GGCAAAAATC ACAGATAAAA CTGTAGATGG AATATACATT
GGTACGCGTA ATGGTGAAGG TAACAGACCA AATACAGGAG CTAATACCTT GCGTAATGAA
AATTACGTGA GTTTGAGCAG CCCGCTGACT AACAGAACTT CACCGTTGTA TATTTTCACT
TATGCGGAAC TTAAATTTAT AGAAGCTGAA GCGGCTTTCC GCTTAGGGGC AAGCGGCAGA
ACCAGAGCCT ATCAGGCTTA CCTTGCCGGT ATCCGCTCCA ATATGGACAG ACTACAGGTG
CTTCTGGCAG ACAGGGAGGC TTATGTGAAC AGTACAACTG TTAGTGTAGG CGAAGCAAAC
TTAACATTAG CATTAATTTT CAAAGAGAAA TACGCTGCAT CTTATTTAAG TCCTGAATCC
TGGAATGACA TGAGGAGGTT TGATTACCAG TATAAGAATT TCAGGCTTCC ACTGGGAGCA
GTTTTACCTA CTTTTATCAG AAGAGTGGCA TATCCTGCTT CAGAGCGCTC AAAGAACGGT
TCTAATGTAC CAGCAGAAGT ACCTTTGAGT ACGCCGCTTT GGTGGGACAA ACCATAG
 
Protein sequence
MKRNNIFSIF ILLVSIAAIN TGCKKYFDQN ENPNLVQNPP INAMLSTATQ KAALNTQRFA 
SFNNYYAQYL ASPSANGATD TYQITDNTTQ WNNAYYAMAD LADMIGKAQA AGATEHLGVA
QLLMAYTLGL VADTWGSAPY TDAFATSGSL TPKYDSEEAL YQTSLNLINE SINNLKLTTA
TIKLDATSDL IHAGVRADWL RTAYGIQARF LNKISKKSTY NAAAVLTAVD NSYLPATKEA
SMAVFSGVNP WAQVAINNAG NLLDGWLSEN FVNHMNGTTY GLFDPRLAKI TDKTVDGIYI
GTRNGEGNRP NTGANTLRNE NYVSLSSPLT NRTSPLYIFT YAELKFIEAE AAFRLGASGR
TRAYQAYLAG IRSNMDRLQV LLADREAYVN STTVSVGEAN LTLALIFKEK YAASYLSPES
WNDMRRFDYQ YKNFRLPLGA VLPTFIRRVA YPASERSKNG SNVPAEVPLS TPLWWDKP