| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2253 |
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| Symbol | |
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| ID | 8253359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2618365 |
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| End bp | 2619111 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644935902 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_003092519 |
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| Protein GI | 255532147 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGCA AACTAAATTG TGTTATTATT GATGATGAGA AACATGCTGT TGATCTGCTG
GCGGATTATA TTGAAGCAAT GCCAAATCTG CAATTGTTAA AGTATTTTAC TGATCCGCTT
AAGGCATTGA TGGAAATTAC TTTGGAAGAT AATATTGATG TTCTTTTTAT GGATGTTGAC
ATGCCGGGAA TGACAGGACT GGATTTATCC CTGGCCATTA GGTATAAAAC CAAATATCTT
GTTTTTACTA CTGCGCATTC CAAATATGCA ATTGATGCTT TTGGTGTACA GGCAAATGAA
TATCTTTTAA AACCGATTTC TATGACCAAA TTTGCATTGA TGATCAATCG GTTGCTCAAG
TCAGAAATTA ATCTTAAAAG AGAAATGAAA GATGAGGATT TCTTTTTTAT TAAAACGGAT
CAGGTTCAGA AATACGTAAG GGTTAATCTG AGAGACCTGG TTGCTATTGA AGGTTTAAAC
AATTATGTAA AGATCCATAC CGTTAGCGGT ATGCATATTG CTTATTTAAC AATGAAGGAG
CTGGAGACCA AATTAGAGGG TAACAGTTCG TTTATACGTG TTCAGCGGTC TTTCATTATC
TCAATGGATT TCATTAATAA AGTTGAAGGT GCAAGTATTA CACTGAACAA TAAACTGGAG
GTTCCACTTG GAACAACTTA TAGGAAACAG TTTTTAACTT TTTTAGAAAG GAACACGCTG
AGATCTAACC GGAATATATC AGATTAG
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| Protein sequence | MDSKLNCVII DDEKHAVDLL ADYIEAMPNL QLLKYFTDPL KALMEITLED NIDVLFMDVD
MPGMTGLDLS LAIRYKTKYL VFTTAHSKYA IDAFGVQANE YLLKPISMTK FALMINRLLK
SEINLKREMK DEDFFFIKTD QVQKYVRVNL RDLVAIEGLN NYVKIHTVSG MHIAYLTMKE
LETKLEGNSS FIRVQRSFII SMDFINKVEG ASITLNNKLE VPLGTTYRKQ FLTFLERNTL
RSNRNISD
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