Gene Phep_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2216 
Symbol 
ID8253322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2553762 
End bp2555720 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content45% 
IMG OID644935865 
Producthypothetical protein 
Protein accessionYP_003092482 
Protein GI255532110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TAAATAAGGA CATCATATTA AAATATATAC GCATGAAAAT ATACAGACCA 
ACAGCATATT TCTGCTTTGT GCTATGCATC AGTAGTCTGC TGATCACCAG CTGCTACAAG
GAAGAACATT TTGATTTCCC CGGACCTTAT GAAGAAGCAA ATACCGTTAA CCCCGATTCA
CTTCCTTTTC CATTTGATGT AAACAAGCAG GCAGGGGTAT GGCTGGTAAA AAATGGAGTG
CCCGATTACG GAAAAGTACT GTTTAAAGGC TATACAGATT ATTACCCAAA AGGGGATACC
CTTTCCTGGG TGAAGGAAAA CGACGGGTTA CACATGCTTC CGCATTTTAG CTTTTATCCT
TTGTCCAATG CAGATCATTT TGCGGGTGAT CCCAACAGCT ATAAGTTCAA TTGGGTATAT
TCCAAATACT TTGTTCCTGT AGGCTCCGGA AAAAGTTTCT ATATGTACGC TAAAGTTACA
TTTGGCACAT TTAACAGTAC GGCTGCAGGT TTGTCTTTAG GAAAAAACTG GGATACAGGT
GGTCCTTTTA CTTTTGGCCT TGATGGAAAT ACCTCAACCG GCGAACCTGG CTTTTTCCTC
GACCTTTATG GTAAAAACGG AATAACAGTT AACCCTGCCC TGGGCTGGCC AACCGTAACC
CAGGTAATGA CACCCGGTGT CCCTGCCAAT ATGGAAGTGG TCATCACCAA TGGGATTTTT
TATGTAAAGG TAAATGGCAC GCTTGTATTC ACCTTTAAAA TGGCAGCCGA ACGGGCCTAT
TTTTATACTC CGCAAATCCG CCCATGGCGC AACTTTGTTG CTGTACACGA CATGTACATA
GAAAGCCGCG AAATGTATAC GCTTGATTAT GCCATGCATG AATACGAAGG AAGCTATAAC
AAGATCCAGG CGCCCGCCCT GGCCAAAACC CCTAACGGAG AATTGCTGCT CTTTGCAGAA
GGACGCTCTA CACCCACATC CGCCAAAGAA AGGGTAGCGC AAAATACCAT GCCGGTAGGC
AATACCGATA TCATCATGAA AAGATCTGCT GATGGGGGCA ATACCTGGAG CAACCAGCTT
ACTGTACTTG CAGGTAATGG CAGCAATTTA ACATATTGCT TTCCACAGGT GGTTACAACA
GATAATGGCA AGATCATTTT ACAATACAGT ACCATAGGCG GTGCTTTCGC GGCCAATAGC
AATGCCTTCA CTTATGATGT CAACTCACAG CGGATCTACC AGATTGAATC GAATGATAAC
GGCCTAAGCT GGACAATACC GGTAGAAATC ACAGCTTTTA AAAATACTGC AGCAGGATAT
ATTCAGGGTG GTGCCGTACA TGGTATTGCA CTTAAATCTG CCACCTACAA TAAACGCCTG
GTTATGCCCC TTACTTACAG TACCAATGTG GTCAGAATGG CCCTTTCTGA TGACGGCGGG
ATTACCTGGC GTCTCGGCAA GGCAATCAGT GGCAGCCGTT TAACGAAGGC CACTGTAGTC
GAATTGTCGG ATGGCAGGTT AATGATGGTA GCGGGACATA CCAATACCAG CCCTAAAAAC
AAACTGGTTT CCTATAGCAG TGATGGTGGC GACAACTGGA CTGCAGCAGC CAATATTTCC
GCTGATGTAA AAACAGGAGA TTATGGACAT CTGTTCGGAG GAATCATCCT GAAAGGTAAA
GACGGAGAAA TACTTTTGGT AAACCCGATC AACAGAGAAA CAGATACAGA AGTTAAAAAC
AGTCCTACTT ATGCCGTGGC ACCTGTTGTT TTTAAAAGCA CCAGCAATGG GCAGGCTTAT
ACTACAGTAG GGCCGCTTTT CTCAAGAGAG GCTTATTTTG GTTACAACGC CCCGATTGGA
AACATGGATG GCATCGTATT GGACGATGGC AGGATTGTGA TCGCCGGAGA AGGAGGGGTA
GAAAGTCCCG CCGAAGGGAT TGTGATCTAT AAGAAGTAG
 
Protein sequence
MIKLNKDIIL KYIRMKIYRP TAYFCFVLCI SSLLITSCYK EEHFDFPGPY EEANTVNPDS 
LPFPFDVNKQ AGVWLVKNGV PDYGKVLFKG YTDYYPKGDT LSWVKENDGL HMLPHFSFYP
LSNADHFAGD PNSYKFNWVY SKYFVPVGSG KSFYMYAKVT FGTFNSTAAG LSLGKNWDTG
GPFTFGLDGN TSTGEPGFFL DLYGKNGITV NPALGWPTVT QVMTPGVPAN MEVVITNGIF
YVKVNGTLVF TFKMAAERAY FYTPQIRPWR NFVAVHDMYI ESREMYTLDY AMHEYEGSYN
KIQAPALAKT PNGELLLFAE GRSTPTSAKE RVAQNTMPVG NTDIIMKRSA DGGNTWSNQL
TVLAGNGSNL TYCFPQVVTT DNGKIILQYS TIGGAFAANS NAFTYDVNSQ RIYQIESNDN
GLSWTIPVEI TAFKNTAAGY IQGGAVHGIA LKSATYNKRL VMPLTYSTNV VRMALSDDGG
ITWRLGKAIS GSRLTKATVV ELSDGRLMMV AGHTNTSPKN KLVSYSSDGG DNWTAAANIS
ADVKTGDYGH LFGGIILKGK DGEILLVNPI NRETDTEVKN SPTYAVAPVV FKSTSNGQAY
TTVGPLFSRE AYFGYNAPIG NMDGIVLDDG RIVIAGEGGV ESPAEGIVIY KK