Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2132 |
Symbol | |
ID | 8253238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2456738 |
End bp | 2458204 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935781 |
Product | glutamate synthase, NADH/NADPH, small subunit |
Protein accession | YP_003092398 |
Protein GI | 255532026 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.550582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.12901 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAG TAACTGGATT TTTAGAGTAT GAAAGAACTG CTCCTGTAAA AGAAGATGCT AAAACTCGTT TAAAACATTA CAATGAGTTT GTTGAAACTT TTGAAGCTGA GCAAATTAAC AAACAGGCAG CAAGATGTAT GGATTGCGGG GTGCCGTTTT GCCAGTCGGG CTGTCCGCTG GGTAACGTAA TCCCTGAATT TAATGAGGCT GTATATAAAG GGGATTGGCA GCTGGCTACA ACTATTTTGC TGAGCACCAA TAACTTTCCT GAATTTACAG GTAGGATTTG TCCGGCGCCA TGCGAATCGG CCTGTGTACT GGGGATCAAT AAATCGCCTG TATCTATTGA AGAGATTGAA AAGCACATTA TTGAAACGGC CTTTGCCAAA GGTTATATCA AAGCCGAACA GCCATTGATC CGTACGGGTA AAAAAGTTGC CGTTATTGGT TCAGGACCTG CTGGTCTGGC AGCTGCAGCG CAGCTGAACA AAGCCGGCCA TGAGGTGGTG GTTTACGAGC GCGATGATAC ACCAGGTGGC TTATTAAACT ACGGTATCCC TGATTTTAAA CTGCAAAAAG ATGTAGTAAC CAGGCGCATT GCCTTAATGG AAAAAGAGGG CATTGTATTT AAATGTAATG CAAACGTAGG CGTAAATGTA GAGCTGAATA CTTTATTAAG GGATTATCAG TCGATCATTC TTGCTGGTGG ATCAACCATT CCACGTGATC TTCCTGCCAA AGGCAGGGAA GCCAAAGGGG TGCATTTTGC GATGGACTTT TTAAAACAGC AGAATAAACG TGTAAGGGGC TTTGCGGTGG ATGGAGAAGA TATTTTAGCA ACCGGAAAAG ACGTTATCGT GATTGGTGGT GGTGATACTG GATCTGATTG TATCGGTACC TCTAACCGTC AGGGTGCCAA ATCGGTAACC CAGTTCGAGA TCATGCCGAT GCCTGCATCT GCACGTACGT CAAATATGCC ATGGCCAACA TATCCGATGC TGTTAAAAGT AACTACATCA CATGAAGAAG GCTGCGAAAG GGGCTGGGGT GTAAATACCA AGGAGTTTAT CAAAGATGAG CAAGGCAACC TTAAAGCCGT AAAAGTAGTA GATGTGGAGT GGGATATTGA TGCTACAGGC CGCCCCTTGA ATTTCAAGGA AAAACCTGGT ACAGAGCGCG ATCTGCCTTG TCAGCTGGTA TTGCTGGCTA TGGGTTTCCT GCATCCGCAG AAAGAAGGTT TAATTGAAAA ATTAGGCGTG GAAACCGATA ACAGGGGTAA TGTTAAAGCA GAAGAAGGTA AATATCAGAC CAATATTGCT AAAATATTTG CTGCCGGCGA TATGCGCCGT GGACAATCAC TGGTTGTTTG GGCCATTTCT GAGGGTAGGG AAGCTGCACG TAAAGTGGAC CAGTACCTGA TGGGGCATAG CAGTTTGCCG TCTAAAGACG GTATCCCGTA TGCATAA
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Protein sequence | MGKVTGFLEY ERTAPVKEDA KTRLKHYNEF VETFEAEQIN KQAARCMDCG VPFCQSGCPL GNVIPEFNEA VYKGDWQLAT TILLSTNNFP EFTGRICPAP CESACVLGIN KSPVSIEEIE KHIIETAFAK GYIKAEQPLI RTGKKVAVIG SGPAGLAAAA QLNKAGHEVV VYERDDTPGG LLNYGIPDFK LQKDVVTRRI ALMEKEGIVF KCNANVGVNV ELNTLLRDYQ SIILAGGSTI PRDLPAKGRE AKGVHFAMDF LKQQNKRVRG FAVDGEDILA TGKDVIVIGG GDTGSDCIGT SNRQGAKSVT QFEIMPMPAS ARTSNMPWPT YPMLLKVTTS HEEGCERGWG VNTKEFIKDE QGNLKAVKVV DVEWDIDATG RPLNFKEKPG TERDLPCQLV LLAMGFLHPQ KEGLIEKLGV ETDNRGNVKA EEGKYQTNIA KIFAAGDMRR GQSLVVWAIS EGREAARKVD QYLMGHSSLP SKDGIPYA
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