| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2102 |
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| Symbol | |
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| ID | 8253207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2423512 |
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| End bp | 2424495 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935751 |
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| Product | cell envelope-related function transcriptional attenuator, LytR/CpsA family |
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| Protein accession | YP_003092369 |
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| Protein GI | 255531997 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.246536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC TATTGTTTTA TATTTTTCTG CTGGCCTTCT CCTTCCAGGT AAATGCCCAG
GACACCACTT CAACAGCTAT AGCCCCTGCG GATTATGCCA AACCTCAGGC TGTTCAGTTA
AACAGATCGG CCGAAGCACT GGGCATATCA CCCAAAGTAA GTGCAAAGGT AAAAGCCATG
CCAAACCCAC CGGTAAATAT GGCCCTTTTT GCGGTCGACA GGCGTCAGGC AGGCGAACGG
GCAAATTCCG ATGTGATCAT GGTCATTTCC ATCGATCAGC AAAGCGGAAA AATAAAGATG
TCTTCCATTA TGAGGGATAC TTATGTAAAT ATTGACGGGC ATGGCATGGA TAAGATCAAT
GCAGCTTATG CACTTGGAGG GCCTCAGCTT GCTATAAAAA CCATCAATCA GAACTTTGAC
CTCGACATTA AGGATTACAT CAATGTTGAT TTTTACAGTG CTGCAAGAAT AGTAGATGCC
CTTGGAGGGG TAACGGTAAA TGTAAAGCAG CCAGAGCTTT CGTATCTTAA CAATTACCTG
GATGAGCTGG CGATTTACGA GAAGATTCCG GCAGTGCATG TAAACAGTGC AGGCCTCCAG
AAACTGACCG GCAGACAGGC TGTAGCGTAT ACCCGCATCA GAGGGGTAGG GAATGGCGAT
TATGAAAGGA CCGAACGTCA GAGAAGTGTA CTGGTTGCGC TTTTCAGCAC ACTTAAAAAC
TCCGGTTCGC AAATGCTGCC GGCCATCGCT TCACAGGTAT TGCCCAACCT GGAAACCAGT
ATGGGACAGA TGACCCTTTT CAGCTTTGCA GGTAGTGTGC TGAATTCTAA AAATAAAGTG
ATCGATCAGG CAAGGTTTCC ACTGGATGGG CAAAGTGCGG GGAAAAGAAT CAACAACATC
TGGTACCTTA CTGCCGATTT AAAAGCCACT ACCACCTCCT TACATAATTT TATTTATAAA
AGCATACAGC CTGCTGCAAA ATAA
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| Protein sequence | MKKLLFYIFL LAFSFQVNAQ DTTSTAIAPA DYAKPQAVQL NRSAEALGIS PKVSAKVKAM
PNPPVNMALF AVDRRQAGER ANSDVIMVIS IDQQSGKIKM SSIMRDTYVN IDGHGMDKIN
AAYALGGPQL AIKTINQNFD LDIKDYINVD FYSAARIVDA LGGVTVNVKQ PELSYLNNYL
DELAIYEKIP AVHVNSAGLQ KLTGRQAVAY TRIRGVGNGD YERTERQRSV LVALFSTLKN
SGSQMLPAIA SQVLPNLETS MGQMTLFSFA GSVLNSKNKV IDQARFPLDG QSAGKRINNI
WYLTADLKAT TTSLHNFIYK SIQPAAK
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