Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2092 |
Symbol | |
ID | 8253196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2411894 |
End bp | 2412730 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644935740 |
Product | Phytoene synthase |
Protein accession | YP_003092359 |
Protein GI | 255531987 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.784236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0129456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC TATTTGATGA GCTTTCTTAC TCAGTTAGCA AGATAACAAC CCAAAAGTAT AGTACGAGTT TTTCTTTAGG AATTTTGGCA CTGAAACCAT CTGTTCGTTC TGCTATATAT GCGATATACG GGTACGTAAG ATTAGCAGAT GAAATTGTTG ATAGTTTTCA GGGCTACGAT AAAGAGAAGT TGCTGAACAG ATTAAAACAA GAAACAGAAA ATGCGTTGCA GGAAGGTATT TCACTAAACC CGATTTTACA ATCTTTTCAG GAAACCGTAC ATAAGTACCG AATTGAAAAA AAGCTGATTG AGGATTTTTT GCACAGTATG GAAATGGATT TGCAGAAAAT AGATTACAAT TCCGATTTGT ACAATGAATA CATTTATGGT TCTGCAGAAG TGGTTGGGCT AATGTGCCTG CAGGTTTTTA CGGATGGGAA TAGAGAAAAA TATGAAGACC TTAAACTTTA TGCGATGAAA CTGGGCTCAG CTTTCCAGAA AATTAATTTT TTAAGGGATT TGAGAGATGA TTATCAGATT TTAGGCAGGA CATATTTCCC GAATATTGAT ATGGGGGTAT TTGATAACCA TGTGAAATGC CTGATTGAAA AGGAAATAGA AGAAGAATTT AAAGAGGCGT TAATCGGAAT TAAGAAACTA CCAGGTTCTT CAATGTTTGG GGTGTATCTG GCTTACAAAT ACTATTTATC TTTGTTCAAG AAAATAAAAA GAAAATCTTC TAAAGACATC TTGAATAACA GGGTCCGAAT TCCCAATTCT GAAAAGGCGT TCGTGGCCTT CAAAAGTTAT GTAAGATATA AAACTGCTTT TTTATGA
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Protein sequence | MKHLFDELSY SVSKITTQKY STSFSLGILA LKPSVRSAIY AIYGYVRLAD EIVDSFQGYD KEKLLNRLKQ ETENALQEGI SLNPILQSFQ ETVHKYRIEK KLIEDFLHSM EMDLQKIDYN SDLYNEYIYG SAEVVGLMCL QVFTDGNREK YEDLKLYAMK LGSAFQKINF LRDLRDDYQI LGRTYFPNID MGVFDNHVKC LIEKEIEEEF KEALIGIKKL PGSSMFGVYL AYKYYLSLFK KIKRKSSKDI LNNRVRIPNS EKAFVAFKSY VRYKTAFL
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