| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1867 |
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| Symbol | |
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| ID | 8252971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2156917 |
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| End bp | 2157867 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935518 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003092137 |
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| Protein GI | 255531765 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.449047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATAG CAAACGAAAC TAAAGTAGGC ATCCTGGCGG CCTTTTCAAT TACCTTATTA
ATTATTGGTT ATAACTTTTT AAAGGGTAAT GCCATTTTTT CGAATGAGAC CGTGCTGTAC
GCCAGATACC CTAGGGTTGA TGGACTGGGC GTGTCCAAAC CAGTTCTGAT CAATGGTTTT
CAGATTGGCC GCGTAGATAA GCTACAATTA CAATCAGATG GGAGTATCCT GGCCACTTTA
AAGATCAAGG GAAAATATGA AATCCCAAAA AACAGTATAG CTAAACTGGA AGGTACCGAC
CTGCTGGGCA GTAAAGCTAT TGTAATGGAA CTGGGCACGG GTCAGGATTT TGCGCAGGAT
GGGGATACCC TTAATGCAAA TGTGGCTAAG GGTCTGCTTG AAACCGTACA GCCGGTTCAG
AAAAAAGCTG AACTGATCAT CACTAAAATG GATTCGATCC TGACAAGCGT AAACTCTATC
CTAAACCCTA ACTTTCAAAA GAATGTTGAT AAAAGTTTTA ACAGCATAGC TTCTACGCTT
TCTTCATTGG AAGCTACATC TAAAAAGGTA GATAATCTGG TGGGCTCTGA AGGGTCCAGG
GTATCTGCAA TCCTGGCCAA TGTAGAGGCC ATTTCAAGTA ACCTGAAAAA GAACAATGAA
AAGATAAACG GCATATTGAA TAACATTGGC AATATCACAG ATCAGGTGGC TGCAGCTAAT
TTTAAACAGA CCATAGAGAA TGCCAATAAG GCCATGGCCG ATCTGCAGAC CATTGTTAAT
AAGGTGAACA ACGGACAAGG AACCCTGGGT ATGCTGGTGA ATGATACAAA AATGTATGAA
AACCTGAACA ATGCCTCTAA AAACCTGGAT AACCTGATGA TAGACCTGAA ACAAAATCCT
AAACGTTACG TTCACTTCTC CGTATTCGGA GGTGGTAAAA AGGATAACTA A
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| Protein sequence | MKIANETKVG ILAAFSITLL IIGYNFLKGN AIFSNETVLY ARYPRVDGLG VSKPVLINGF
QIGRVDKLQL QSDGSILATL KIKGKYEIPK NSIAKLEGTD LLGSKAIVME LGTGQDFAQD
GDTLNANVAK GLLETVQPVQ KKAELIITKM DSILTSVNSI LNPNFQKNVD KSFNSIASTL
SSLEATSKKV DNLVGSEGSR VSAILANVEA ISSNLKKNNE KINGILNNIG NITDQVAAAN
FKQTIENANK AMADLQTIVN KVNNGQGTLG MLVNDTKMYE NLNNASKNLD NLMIDLKQNP
KRYVHFSVFG GGKKDN
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