| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1585 |
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| Symbol | |
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| ID | 8252687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1874738 |
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| End bp | 1875517 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935239 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_003091860 |
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| Protein GI | 255531488 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.80455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0356965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAATA CAATTATTGT AGACGATGAA GAATTTGCCC GTTCTTCTCT GTATTTTCTA
TTACAGGAAA ATTGTGGGGA GGTACATATT TCGGGTATAG CAAAATCTGT AGCTGAAGCC
CGGAATTTGC TGACCCAGCA TGCTGTAGAC CTCATCTTCC TGGATATAGC CATGCCTGGT
GAAAATGGCT TTGAACTCAT TCCTTATGCC CAATCGAATA ATGCGCACAT CATTTTTACT
ACGGCTTACG ACCAGTATGC ACTTAAAGCC ATTAAAGCCA ATGCGCTTGA CTATTTACTG
AAGCCCATTG ATATTGATGA ACTGAAAATT GCGGTTGCTA AAGCAGTAAG GTTTATTGCA
CTAAATAAAA AAGAGAATAA CCGCAATGAA AGCCTTCAGA GCCTGGCGGT TAATCTGGCT
GAGCGAAACG AAATCCGAAA AATCAGTCTC CCGAATGGTC AGGGCTATTC GCTGGTGAAC
ATTGATGACA TTATCCACAT CGCGGCAGAC AGCAATTATT CTGTTTTTTA TTTTGCCAAC
AAGGATAAAA TTACCGTTTC CAAAGTTTTA AAGGAGTACG AAGAGATCCT GCCCGACCAC
CAGTTTGTAA GGATCCATAA ATCGAGCATT GTTAATCTCA ATTACCTGAA AGAATACAAT
TCAAAGAATG GTCTTGAAGT GATCCTTAAA AACGGGGAAA AAATAGCGGT ATCGAGGAGG
CGTGCCAGTG AATTTGTGGA AAAGGTTAAA TTGTATACCA GTTTTGATCA TGATAAATAA
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| Protein sequence | MLNTIIVDDE EFARSSLYFL LQENCGEVHI SGIAKSVAEA RNLLTQHAVD LIFLDIAMPG
ENGFELIPYA QSNNAHIIFT TAYDQYALKA IKANALDYLL KPIDIDELKI AVAKAVRFIA
LNKKENNRNE SLQSLAVNLA ERNEIRKISL PNGQGYSLVN IDDIIHIAAD SNYSVFYFAN
KDKITVSKVL KEYEEILPDH QFVRIHKSSI VNLNYLKEYN SKNGLEVILK NGEKIAVSRR
RASEFVEKVK LYTSFDHDK
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