| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1577 |
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| Symbol | |
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| ID | 8252679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1863020 |
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| End bp | 1863862 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644935231 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003091852 |
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| Protein GI | 255531480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0375149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.121824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAATG TTAACTTTTT GTATCCACGT TGGGGTGCTG AACATGTTGA CTGGAATGAA
TTTTTAGCCG AAGTTAAAGA ACAGGGATAT TATGGAATTG AATGGTACCC TTATGGGGAA
GGGGATGCCA ATTATGAAAC AGTCATAGCA CAGCTAAAGG ATGCTGGTTT AAAGTATGCA
ATTGTCATGA CTGTAAAGGA TGAGCCCGAG TCTGAAGCTG ATTATTTTCA ACGCTTAGAA
AAGCAATTGA GTGAATTGGC TTTATTGGGA CAGCAAAGCT TACCACCTTT ATTTATCAGT
GCACAAACAG GTCGGGAGTA TTTTTCATTA GATGAGGTAT ACAGATGCCT GAGCATATGT
GATAAAGTGC AATCAGAGAC AGGAATAAAA ATTTATCAGG AAACACATCG AAATAAATGG
GCTTATGGTT TACATAAAAT TCCTGAGGTA TTAAAAAAAT ATCCCGACCT CAGGTTTACA
TTGGACATTT CACATTGGTT TTGTGTTTCC GAGAGTTATC TCGAAGATCA ACGTGACAAA
TTATTAAATA TTCTACCACA TGTTGAACAT ATCCACTCCC GTGTGGGCTA TACACAAGGT
GCACAAATAC CTGATGTAAC CAATCCTTTG TATAAAGATA TTGTCGATAT ACATCTGGAG
ATCTGGCAAC AGTGGGTGGA TTTAAAAAAG ATAAACGGAG TAGAAAATAT TACCATCAGT
ACAGAATTTG GTCCTCCACC GTATTTAATT ACGACGGGCC ATACCGATAC TGATTATTTA
AAACAGTGGG AGCAAAATTT GTGGATAAAA AAATACCTTA TTCAGCTGCT AAACCTTACC
TAA
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| Protein sequence | MVNVNFLYPR WGAEHVDWNE FLAEVKEQGY YGIEWYPYGE GDANYETVIA QLKDAGLKYA
IVMTVKDEPE SEADYFQRLE KQLSELALLG QQSLPPLFIS AQTGREYFSL DEVYRCLSIC
DKVQSETGIK IYQETHRNKW AYGLHKIPEV LKKYPDLRFT LDISHWFCVS ESYLEDQRDK
LLNILPHVEH IHSRVGYTQG AQIPDVTNPL YKDIVDIHLE IWQQWVDLKK INGVENITIS
TEFGPPPYLI TTGHTDTDYL KQWEQNLWIK KYLIQLLNLT
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