| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1395 |
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| Symbol | |
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| ID | 8252495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1662799 |
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| End bp | 1663404 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935048 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003091671 |
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| Protein GI | 255531299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0347939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAT CCAGATTTTT AAAACTCAAC CAGCTTTCAG CAGGTGATTA CCAGGCTTTT
TTATACGATT GTGATGGTAC CCTTGCCGAT AACATGCCCG CACATACGGC CACTTACTTA
GCCACAGCCC ATGAATATGG ACTAAGTATT GATCCGGCCA TGATCAATGA ACTGGCCGGA
TGGCCGGTAG CTGATGTGGT AGTAGAAATG AATAACCGTT ATAAAAGCAA TATAGATCCG
ACTGCTTTTA GGACAAGAAA AGCCGAGCTG TATGCAGCCA AATATATACA AAAGATTGTA
CCCATAGATT TTGTAGTGCA ACACCTTAAG GCCAATGCAG GTAAGGTGCG TATTGGTGTA
GTTTCGGGTG GCGACAGGGA GGCTATTGCA CAAACCCTGG AGGTGCTGGG TATTGCTGAT
CTTGTAGAAG TTTTGATCTG TGCAGGGGAC ACCGTCAAAG GCAAGCCCTT TCCTGATCCC
TTTTTAAAAG CAGCTGAATT GTTGGATGTG GAACCATCAA AATGTATGGT CTTTGAAGAT
GGCGTTCCCG GAGTGGAAGC CGCTAAGGCT GCAGGAATGG ACTGGATAAG GATTGATCTG
ATCTGA
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| Protein sequence | MEQSRFLKLN QLSAGDYQAF LYDCDGTLAD NMPAHTATYL ATAHEYGLSI DPAMINELAG
WPVADVVVEM NNRYKSNIDP TAFRTRKAEL YAAKYIQKIV PIDFVVQHLK ANAGKVRIGV
VSGGDREAIA QTLEVLGIAD LVEVLICAGD TVKGKPFPDP FLKAAELLDV EPSKCMVFED
GVPGVEAAKA AGMDWIRIDL I
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