| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1380 |
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| Symbol | |
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| ID | 8252480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1639270 |
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| End bp | 1640958 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935033 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003091656 |
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| Protein GI | 255531284 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.366294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG CAGACTGGTC CGTATTGATC TTAACGCTAG TTGTCATAGT AGTTTATGGC
ATTTACAAGA GCCGAGGAGC GCAAAATATT CAGGGTTACC TGCTGGGCAA TCAATCGCTG
CCCTGGTACC ATGTATGCCT TTCTGTAATG GCTACCCAGG CCAGTGCCAT CACTTTTTTA
TCAGCTCCCG GCCTGGCCTA TTCTTCAGGA ATGAGCTTTG TACAGTTTTA TTTCGGACTG
CCATTGGCGA TGATCGTCCT GTGCATCACC TTTGTGCCCA TATTTCACCG CCTAAAGGTA
TACACCGCTT ATGAATATCT GGAACAAAGG TTTGACCTGA AAACCAGGGC ATTAACGGCC
TTTCTTTTTT TAATTCAACG GGGTCTTTCA ACTGGGATTA CCATTTATGC CCCTTCGATT
ATTTTATCAA CTATACTGAA TATCAATACC ACTTATACTA CTTTGTTTAT TGGTAGCCTG
GTCATATTTT ATACCGTCTA TGGTGGTACT AAAGCCGTTT CTTATACACA GATGCTACAA
ATGAGCATCA TCTTTTGCGG ACTGTTTGCC GCAGGCATTA TGGTGGTACA CCTGCTTCCC
GGCGACATCG GTTTCAGCCG GGCCATTAGC ATAGCCGGAA AGATGGGGCG CACAAATGCC
ATAGATTTTA AATTGGACCT GAACAACCAA TATACGGTAT GGACCGGCTT GATAGGTGGT
TTCTTTTTGC AGCTTTCTTA TTTTGGTACC GACCAGAGCC AGGTAGGCAG GTATTTATCG
GGCGCCTCTG TTAGCCAGAG CAGGCTGGGC TTGTTGATGA ACGGCCTGGT AAAAATACCG
ATGCAGTTCC TGATCCTGCT GATCGGGGTA TTGGTATTCA CCTTTTATCA GTATAACCGT
CCACCCATCT TCTTCAACAG TTTTGAACTG AATAAGCTGG AAAAGAGCAG CTATGCGCCT
GAACTTGATC AAATAAAGGT AAACTATAAC CGTGCTTTTG AAGAAAAACA GCAGGAAGTA
AATCAAATGA ATGCAGCACT TGATGCAAAT GATAAAGCAC GCATTGATAC ACAGAGAAAG
GCTCTACAGG CAGCCGATGA GAAAGAAAAG GCCATCAGAA AACAGGTTAC TGATTTGATG
GTAAAGAATG ATGAGCATGC CAATATAAAA GACAATAATT ATATCTTTTT GAGTTTTGTA
ACGCAATATT TGCCAAAAGG GTTAATAGGT TTGCTGATTG CCATTATTTT CCTGGCCTCT
ATGGGCTCCA CAGCAAGTGC TTTAAATTCA CTGGCTTCTA CAACAGTAAT AGACATTTAT
AAGCGGCTGA TCAAAAAAGA TGGTTCAGAT CACCAATATC TGCAGGCATC GCGGCTGGCG
ACAGTTTTTT GGGGGGTAGT TTGTATCATA ATGGCTTTAT ATGCCAGTAA AATTGGCAAT
TTACTGGAAG CTGTAAATAT ATTAGGCTCT TATATTTATG GTACTATACT GGGTGTTTTC
CTGGTCGCTT TTTATGTAAA GCAAGTAAAC GGGAGGGCTG TGTTCATTGC AGCTTTGCTA
ACCGAAGCTA TTATCGTGCT GCTGGGTAGT CGGGATGTTG TTGCATACCT GTGGTTAAAC
GTGATTGGCT GTGTGCTGGT GGTGTTGATA TCCCTGCTGG TTCAACAAGT CATGCGTAAA
GAAAAATAG
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| Protein sequence | MSAADWSVLI LTLVVIVVYG IYKSRGAQNI QGYLLGNQSL PWYHVCLSVM ATQASAITFL
SAPGLAYSSG MSFVQFYFGL PLAMIVLCIT FVPIFHRLKV YTAYEYLEQR FDLKTRALTA
FLFLIQRGLS TGITIYAPSI ILSTILNINT TYTTLFIGSL VIFYTVYGGT KAVSYTQMLQ
MSIIFCGLFA AGIMVVHLLP GDIGFSRAIS IAGKMGRTNA IDFKLDLNNQ YTVWTGLIGG
FFLQLSYFGT DQSQVGRYLS GASVSQSRLG LLMNGLVKIP MQFLILLIGV LVFTFYQYNR
PPIFFNSFEL NKLEKSSYAP ELDQIKVNYN RAFEEKQQEV NQMNAALDAN DKARIDTQRK
ALQAADEKEK AIRKQVTDLM VKNDEHANIK DNNYIFLSFV TQYLPKGLIG LLIAIIFLAS
MGSTASALNS LASTTVIDIY KRLIKKDGSD HQYLQASRLA TVFWGVVCII MALYASKIGN
LLEAVNILGS YIYGTILGVF LVAFYVKQVN GRAVFIAALL TEAIIVLLGS RDVVAYLWLN
VIGCVLVVLI SLLVQQVMRK EK
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