| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1334 |
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| Symbol | |
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| ID | 8252434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1588289 |
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| End bp | 1589212 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934988 |
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| Product | LysR substrate-binding |
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| Protein accession | YP_003091611 |
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| Protein GI | 255531239 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.622556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTATC AGATAGAACT CAGACACTTG AAATATTTCC AGGTACTGGC CGAAGAACTG
AAGTTCAGAA AGGCCGCAGA GCGACTGTTT ATATCCCAGC CTGGCCTTAG CCGTCAGATC
ATGCAGATGG AAGAAATATT CAATGTTGCC CTGTTTGACC GCAGCAAGAA AAAAGTAGAA
CTTACTGCAG CCGGCTTATA TTTAAAAGAT GAAGTAGATT TTCTTTTCAA CCACCTCGAA
ACCGTCAAAC GTCAGCTGGA TAACATTGGA CAGGGCAGGG AAACTGAACT CCGGATAGGC
TTTTTGGGTT CGGCAGTACA AAAGATTGTC CCGGAACTGG TACTCGGTTT AAATAAGGAA
TATCCCGGCA TACAGACCAT TTTAGACGAA ATGCCGAATA AAATGCAAAT CGAGCTGTTG
GAAAAGGATA AATTAGACCT GGGTTTCGTT CGGCTGCACC GTCTTCCTGA GGGGATTTCC
CGGCACCTGG TTCAGCAAGA GACCTTCTCT TTGGTACTTC CAAAGCAACA TCCCATAAAT
GAGTTTAATT TTAAGGGGAT AGCTGAGTTC AGTAATGAGC CTTTTATATT TTTTTCCAGT
GAGGACAGTC CTTTTTACCA TGACCTGATT ACGAGTATCT GTGAAGACCA TGGCTTTCGC
CCCAAAGTTT TTCACCGGTC TGTAAATGCC TTAACCATAT TCAAACTGAT AGAAGAAGGA
ATGGGACTTG CCATTGTACC CACTTCCCTG CAATACGGGT ACAACCTGAA CGTCAGGTTC
ATTGAACTTA AAAACATCCC CCAAAGAACA GAACTATACG TGGCCTGGAA AGCATCAAAC
CGGAACCCGG CACTAAAAAA TGTAATTAAA TTGCTGCGCA AATCCATTCC AGAATTATTG
GTTACAGCTA AAACTGCACC CTGA
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| Protein sequence | MGYQIELRHL KYFQVLAEEL KFRKAAERLF ISQPGLSRQI MQMEEIFNVA LFDRSKKKVE
LTAAGLYLKD EVDFLFNHLE TVKRQLDNIG QGRETELRIG FLGSAVQKIV PELVLGLNKE
YPGIQTILDE MPNKMQIELL EKDKLDLGFV RLHRLPEGIS RHLVQQETFS LVLPKQHPIN
EFNFKGIAEF SNEPFIFFSS EDSPFYHDLI TSICEDHGFR PKVFHRSVNA LTIFKLIEEG
MGLAIVPTSL QYGYNLNVRF IELKNIPQRT ELYVAWKASN RNPALKNVIK LLRKSIPELL
VTAKTAP
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