| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1328 |
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| Symbol | |
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| ID | 8252428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1580222 |
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| End bp | 1582618 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644934982 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003091605 |
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| Protein GI | 255531233 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0322179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAA CCGGCATCTT GTTTTTTTGT CTTCTGCCTT TTTTTATCCG TGCACAGCAA
CTGGAAATAT CCGGAAAAAT TAAATTCCGT GAAACAGCAG CAGAAGGTGC AACCATAACT
TTAACTACAG TAAATCAGCG TAGAATAAGT GATGCGAATG GTGGCTTTAG TTTTAAAGGA
CTGCCATCCG GAAAATATCA TGTCCGTGTA TCCTTTACGG GAGCCAGGCG CTTTGATCAA
ACTGTTGAAA TAAAAGATAA AAGCATTGAT ATTGTTGTAA CGCTTGAGGA AGCACAAGCT
GTGCAGTTGG ATGAAGTTGA TGTCACCAGG GTTAACGATC GGGTTGCCGA TAAGCTGATG
CAGGTAGAAG GAACTGCAAT TTATGCCGGA AAAAAGACTG AGGTCATCAA TTTAAAAAAC
ATCAATGCCA ACCTGGCTAC CAATAATGCA AGGCAGGTAT ACGCCCGGAT TGCCGGTCTG
AATATCTGGG AGTATGATGG TGCTGGGCTA CAATTGGGTA TTGGTGGTCG TGGCCTGAAC
CCCAGCAGGG TATCAAACTT TAATATGAGG CAAAACGGAT ATGATATTAG TGCCGATGCT
TTGGGCTATC CAGAAAGCTA TTATACCCCA CCAACCGAAA CTTTAGATAG AATAGAAATT
GTACGGGGTG CCGCAAGCTT ACAATACGGC ACACAATTTG GCGGTATGAT TAATTTTAAG
ATGAAAAAGG GTCCTACAGA TAAGCAACTT GAGTTTACAA GCAGGCAAAC CCTCGGCTCG
TTTGGTTTTT TCAACTCTTT TAACAGCGTT GGCGGACAAG TAAAAAAACT AAATTATTAT
GCTTTTTATC AATATAAAAA GGGTGATAGC TGGCGACCAA ACGGTCACTT TGACCAAAAT
ACCGCTTATG CCCACCTAGA TTATGCCTTT ACCAACAAAC TAAAGTTAAC TGCCGAATAT
ACCCATATGG ACTACCTGGC ACAACAACCA GGAGGCTTAA CCGATGAACA GTTTGAAGCA
GATCCTTCAG TATCTGTAAG GGCTAGAAAC TGGTTTAAGG TAAAATGGAA TTTATTTAAC
TTAAGCCTTG ATTACCAGCT CGGCGAGCAT ACCAAACTCA ATTGGATAAA CTATCATTTA
GCTGCTGGCA GGGAAGCTTT AGGGGTTTTA AGCTATATCA ATCGCCCTGA TCCGGGTGAA
GGCACACCAA GGGATTTGAT GGCTGATAAA TATGACAATT ACGGTTCAGA ACTCAGGGTA
TTGCACCAAT ACAGTTTATT TAACAACCAG ACCAGCAGTT TACTCATAGG TGCAAGAGCA
TATAAGGGGT TAACATTTAA AAAACAGGGC GATGCAGATA CGGGATTAGG ACCTGATTTT
AACTTTTTAA ACAGTCAACC CAATAAGTCC GATTTCCGGT TTCCGGGTAC AAATTTAGCC
TTGTTTGCGG AGAACATTTT TCAGATAACC AGTAAATTGA GTATTACCCC CGGTGCCCGA
TTCGAGTATA TTTATACCGG CGCTAAAGGA AATTACACAC AATTTCAATT TGGTGTTCCC
GATTTGACAA GAACCGACAA CAAAAGCAAC CCACGCTCAT TTGTTCTCTT TGGCATAGGC
ACTTCTTATA AACCACACCC TACCATTGAA CTTTATGCCA ATATTTCCCA AAACTACAGG
TCAATCAATT TTACCGATTT AAGGGTACAG AATCAAAATG CAAGGGTTGA TTCTTTATTG
AAAGATGAAA GAGGCTACAC TGCTGATGGT GGTGTAAGAG GGAATTTAAA AGATTGGCTG
TATTATGATT TAAGTGTATT TTATCTTAAA TACAACGACA GGATTGGCTC AGTTTTTACC
ACCGATGCCA ACAATATGAT ATACCGGTTA AGAACAAACG TAGCAGATAG CCGAAATATT
GGTTTCGAAA GTTTGATAGA AGCTGATTTA TTAAAGGCTT TTACTCAAGG TGCAAGTAAG
TATAAACTGA TGGCTTATAC CAATTTTTCG TTAATAAATG CGCGGTATAT CCATACAGAT
AATACAGCAA TAAAAGATAA AGAAGTAGAA TTTGTACCAC CACTATTGTT TCGTACAGGG
CTATCGTTCG GGAATAAAAC ATTTAATACC AGTTTACAAT ATGCTTACGT AGCACAACAT
TTTTCTGATG CTACCAATGC AGAAAGTACA CCAACAGCGG TAGACGGTAT TGTGCCTGCC
TACCAAATTG TCGATTTTTC GGCCAGTTAC AACTGGAAGT GGTTTACCCT GTCGGGCAGC
ATCAATAACC TGATGAACGA AAAATACTTT ACACGCAGGG CAGATGGGTA TCCCGGGCCT
GGAATACTAC CTTCCGATCC GCGTACTTAT TATATGACCT TACAATTTAA ATTATAA
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| Protein sequence | MRITGILFFC LLPFFIRAQQ LEISGKIKFR ETAAEGATIT LTTVNQRRIS DANGGFSFKG
LPSGKYHVRV SFTGARRFDQ TVEIKDKSID IVVTLEEAQA VQLDEVDVTR VNDRVADKLM
QVEGTAIYAG KKTEVINLKN INANLATNNA RQVYARIAGL NIWEYDGAGL QLGIGGRGLN
PSRVSNFNMR QNGYDISADA LGYPESYYTP PTETLDRIEI VRGAASLQYG TQFGGMINFK
MKKGPTDKQL EFTSRQTLGS FGFFNSFNSV GGQVKKLNYY AFYQYKKGDS WRPNGHFDQN
TAYAHLDYAF TNKLKLTAEY THMDYLAQQP GGLTDEQFEA DPSVSVRARN WFKVKWNLFN
LSLDYQLGEH TKLNWINYHL AAGREALGVL SYINRPDPGE GTPRDLMADK YDNYGSELRV
LHQYSLFNNQ TSSLLIGARA YKGLTFKKQG DADTGLGPDF NFLNSQPNKS DFRFPGTNLA
LFAENIFQIT SKLSITPGAR FEYIYTGAKG NYTQFQFGVP DLTRTDNKSN PRSFVLFGIG
TSYKPHPTIE LYANISQNYR SINFTDLRVQ NQNARVDSLL KDERGYTADG GVRGNLKDWL
YYDLSVFYLK YNDRIGSVFT TDANNMIYRL RTNVADSRNI GFESLIEADL LKAFTQGASK
YKLMAYTNFS LINARYIHTD NTAIKDKEVE FVPPLLFRTG LSFGNKTFNT SLQYAYVAQH
FSDATNAEST PTAVDGIVPA YQIVDFSASY NWKWFTLSGS INNLMNEKYF TRRADGYPGP
GILPSDPRTY YMTLQFKL
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