Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1310 |
Symbol | |
ID | 8252410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1557094 |
End bp | 1559301 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934964 |
Product | hypothetical protein |
Protein accession | YP_003091587 |
Protein GI | 255531215 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA CTATTTCACG CAAAAATTTT ATAAAAGGTT GTTCGGCCAC ACTTGGCTTA ATAGCTACCG GATTAGGCAG TTTACAAGCG GCAGCACCAG ATGGCGACAC CAGTTTTTAC CAGGGTCAGG CACAAAAACC AGCAGGGGGC ATCTTAAGAG GTTCCTGGGT GCAGACAGAC CTAGCCCAAA AGGGAGACAT TACCCTGCAG CAAAGTGCAA TTATAGTAGC TAAAAATGAA CATTCGGCCG TTCATCAGGC AGCTTTGTTC CTGGCCGCTG ATATAGAAAA GATCAGCGGA TACCGCCCAG CCATACAGGA AACTGTAGTA AAGGGCATTG TAAATATTGT TTTGCAAACT GCAGGAAATG GCAATGCACC AACGGCCCCG CTGAACCGCC TGAAAAACAA ACGGGAAGCT TTTGCTGTAC TGAGCAGCAA CAATACCGTT TGGCTGCTGG GTGCTGATTT CCGCGGAACA GCTTTTGCAG CTTATACCCT GAGCGAAGGG CTGGGCATAG ACCCTCTTTA TCTGTGGACA GGTTATCAGC CCCTGCGGAA TACCAATTTA ATATTGAAGC AGACAAATTT CTTTGCCGAT TCACCTACTG TAAAATACCG GGGCTTTTTT CATGATGATG AGGATGTGTT GCCAAGGCCT TTTGATAAGT ATGGTTTCCC CTTGCGCATA GGAGATGTAC CTTTGGAATG GTACCAACGA TATTTTGAGA CCGCGCTGCG CCTGAAAATG AACATGACGG CACCGTATGT ACGTGTACAC AGGCGCTACG AAGTGCAGAA ATGTGCGAGC GACTGGGGCC TGTATTACAC CTCCCATCAT TATGACATTT TACTGTCCAA TCCTTTTGGC ATTGAACGTT TTCACCTGGC CGAAAAAAGA GGGGTAAGTA AGGAATGGGA CTGGTTTAAA AACAAGGAAA ACATGATCAG CTACTGGCGT GGCGGGGTTG AAGAAAACAA GGACATCAAT GCAATATGGC CTGTAGGCCT GCGTGGAACT GATGACCATG CTTATGAATT CCCGAAAGAT ACACCCGAAA AAGAACAGGC AAAAGTATTC AGGGACGCCA TTGATGCACA GGTAAAAACA GTAAAAGAAC TGGTACCTGC CAGTGAGCCT GCTGCATTTC ATTTTACATT GTATACTGAA ATGCTGGAAA AATACAGGAA ACACCCGGAA GACTTTAATG TACCCGAAGA TGTGATCCTG GTATGGCCGG ACAACAACGA CGGACTGATG CGCGACCTGC CCAATGGTCC CGATAAATGG AAGCATGGGG TGTATTATCA CCTGGCTTAT TTTGGCGGGG CGCCAACCAA ACAAGGCACG CATGTGATTA CACCTTATCG TATTGCTGAA CAGTTTAAGG CCATTGTAGC TGCCGGTGCA ACTGAGTTTA TGCTCGTTAA TGTATCCGAA ATGCGGGAAC ACATTATGGA AGCCAGGATG ATTGCAGACA TTTGCTGGAA TGCAACTGCA GTATTAGACC AGAAGAATGC CGCCGAAAAC TACCTGCAAT GGTGGGCCCG GGAATATTTT GGCATGGCAA ATCCAGCTGT CATAACAAAG GCTTATCAAA ATTATTATGA ATTGATTGAC AGTTCCGAAA AAACCTATTT TGGCGCCACA CAGTTTGAAC TGATCCTTGA CCAGCTGCAC CGCAGGTTCA ATAGAAATCA GCCGGCAAAA TTAGAACCGG CTAAAATAGC TGAACTCAAA GGCAGGAATG AAAAATATGA GGATGCTTTT AAACAGATTA ACCTGGTATT GCCCCAATTG AACAGGGAAC AACGGCAATT CTTTTTTGAA CACCTGGAAC TGGGTTTAAG GATAGACCAT CGGCCAACGC AGGCTGCACT GCTCTTGCTA CAGGCGTTGG CAGAACCCAA TGATGCCAGG GCCTGGAACC TCATTGCAGC AGCAATGATA CCACTTGAAA AACTGGAGGT GGAAATTCTC AGGGCAGAGC GGCCACCTTT CGACAAATGG TATATCCCAA CCTGGATCAG GACACCGGTA GCCCCATTTA ACATACACCG GTCTTATACA CAACTACGGG AGTTTATGGC CAATAATGGA ACTGAAACGC CTATAAAACC CAGAATGACA TTTGGGCATA ACATTGATGG TGCCAGGTTA TGGAGTGATT TTATAGAGGA ATCGGCAAGG ATAAAAGCTA CTTACTGA
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Protein sequence | MKQTISRKNF IKGCSATLGL IATGLGSLQA AAPDGDTSFY QGQAQKPAGG ILRGSWVQTD LAQKGDITLQ QSAIIVAKNE HSAVHQAALF LAADIEKISG YRPAIQETVV KGIVNIVLQT AGNGNAPTAP LNRLKNKREA FAVLSSNNTV WLLGADFRGT AFAAYTLSEG LGIDPLYLWT GYQPLRNTNL ILKQTNFFAD SPTVKYRGFF HDDEDVLPRP FDKYGFPLRI GDVPLEWYQR YFETALRLKM NMTAPYVRVH RRYEVQKCAS DWGLYYTSHH YDILLSNPFG IERFHLAEKR GVSKEWDWFK NKENMISYWR GGVEENKDIN AIWPVGLRGT DDHAYEFPKD TPEKEQAKVF RDAIDAQVKT VKELVPASEP AAFHFTLYTE MLEKYRKHPE DFNVPEDVIL VWPDNNDGLM RDLPNGPDKW KHGVYYHLAY FGGAPTKQGT HVITPYRIAE QFKAIVAAGA TEFMLVNVSE MREHIMEARM IADICWNATA VLDQKNAAEN YLQWWAREYF GMANPAVITK AYQNYYELID SSEKTYFGAT QFELILDQLH RRFNRNQPAK LEPAKIAELK GRNEKYEDAF KQINLVLPQL NREQRQFFFE HLELGLRIDH RPTQAALLLL QALAEPNDAR AWNLIAAAMI PLEKLEVEIL RAERPPFDKW YIPTWIRTPV APFNIHRSYT QLREFMANNG TETPIKPRMT FGHNIDGARL WSDFIEESAR IKATY
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