Gene Phep_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1307 
Symbol 
ID8252407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1555607 
End bp1555942 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content38% 
IMG OID644934961 
Productprotein of unknown function DUF419 
Protein accessionYP_003091584 
Protein GI255531212 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.233005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG AAGATTTACG TGACTACTGC CTAAGCAAGC CCGGAACAAC AGAAGGCCTA 
CCCTTCGGAG AACAAACATT AGTATTTAAA GTAGGTGGTA AAATATTTCT GCTTATCGGG
TTAGAACAAG CCAACCGGTT TAATGCCAAA TGTGATCCCG AACGGGCTAT AGAATTACGT
GAAAGACATC CTGAAATTAT TCCTGGTTTT CATATGAATA AAAAACACTG GAATACCATT
TATATGGATG GTGGTTTAAA ACCAGCACTC ATTCGCGAAT TGATTGACCA TTCTTATGAA
CTGGTTTTTG AAAGCCTGCC TAAAAAGCTG CAATAA
 
Protein sequence
MNIEDLRDYC LSKPGTTEGL PFGEQTLVFK VGGKIFLLIG LEQANRFNAK CDPERAIELR 
ERHPEIIPGF HMNKKHWNTI YMDGGLKPAL IRELIDHSYE LVFESLPKKL Q