Gene Phep_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1242 
Symbol 
ID8252340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1462813 
End bp1463928 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content45% 
IMG OID644934895 
ProductFecR protein 
Protein accessionYP_003091520 
Protein GI255531148 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATT CAGATGAAAA TGACCATTAT CCTGAACTTG CAGCCAGATG GCTTGATGGA 
AGTATAAGTG AGCAGCAAAG GCATACGTTT AATGCCTGGT ATAACAGGGA TCAGGATCAG
CCGCTTATTA TTCCGGCTTC TTTTGCCGCC GATGCGGAAA TCCACAGGGC ACGCATCTAC
CAAAAAGTCC TGATGGGCAT GGAAGATAAA AATACACCTG CGCCGGTAAA GTTTTGGATT
AAGCTGGGCA TTGCGGCATC AATTTGCATT TTGTTTTCGG TTGTCCTGTA TTTTTATATG
CACCAGTCTC GGGTATTTGA CCTGGACCAA TTGGCCAGAC AATATGGTTA TGGCAGCAAT
GTAGCTGTTT TAACAGATCA GAATGGGAAA CAGCACCTGC TGGAAGGTTC TGTTTTCAAT
ATGTCCGAAG GGAAGAGCAG CCTGACCTCC GGAAATGGCT TTGCCAGAAT TGCAACACCC
CGGGGATCAC GTTATCAGAT ACAGCTGGAG GACGGGACGC AAGTTTGGCT GGGGGCCGCC
AGTTCCATTA CTTATCCTGT TACATTTAGG GGCCAGACCA GGACCGTCCG GCTTTCGGGA
GAAGCTTATT TTGAAGTTGC ACATCAGGCA AAAAAGCCTT TTCAGGTTAA AATGATGTCC
GATAAACATC AACTTGATCT CACCGTAATC GGAACCAAAT TTAATGTAAA TGCTTATCCG
GAAGATCAGG AAGTACAAAC ACGTGTTTTT GAAGGTTCGG TAAAACTGAG TTCGGGTAGG
TATACCGCTG TTTTAACAAA AGGGGAAAAA GTAGTTTTTA AGAATGGGAT GCTGCAGCCT
AAGGTACAGC ACCTTGAGGA AGACTGGATG CGGTCTGGAA CGTTGCATTT TGATAACGAT
AATATGAAAC AGGTGATGCG TATGCTGGCG AGGGAATATA ATGTAGAACT GGTGTATAAT
GGCAGGGGAG GGAAGAGGAT GTATCTGACA GGTGAGATTA GCCGGAAAAA TCCACTGAAA
AAGGTTTTGC ATCTTATTGA ACTGGCAACT GATTATCAGT TTTTGCTTGA AGACGGGCGT
GTAACAGTTT TTGAACCCCA TAAAACCCCT TACTGA
 
Protein sequence
MNHSDENDHY PELAARWLDG SISEQQRHTF NAWYNRDQDQ PLIIPASFAA DAEIHRARIY 
QKVLMGMEDK NTPAPVKFWI KLGIAASICI LFSVVLYFYM HQSRVFDLDQ LARQYGYGSN
VAVLTDQNGK QHLLEGSVFN MSEGKSSLTS GNGFARIATP RGSRYQIQLE DGTQVWLGAA
SSITYPVTFR GQTRTVRLSG EAYFEVAHQA KKPFQVKMMS DKHQLDLTVI GTKFNVNAYP
EDQEVQTRVF EGSVKLSSGR YTAVLTKGEK VVFKNGMLQP KVQHLEEDWM RSGTLHFDND
NMKQVMRMLA REYNVELVYN GRGGKRMYLT GEISRKNPLK KVLHLIELAT DYQFLLEDGR
VTVFEPHKTP Y