Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1233 |
Symbol | |
ID | 8252331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1451812 |
End bp | 1452924 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934886 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_003091511 |
Protein GI | 255531139 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0667714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAG TTTCCCTACC CTTTTACACC AAACTGGCTA TGGTGTTGTT CTCCATCATA AGTGCAGGTT ACCTGGCCAT TTTAGGACAA ACCATCCTGG CGCCACTGCT TACTTCATTT TTACTGGCCC TGCTCTTGTT ACCGATGGCC AATTTTATGG AACAAAAATG GCGCTTTAAA AGGAGCATTG CAGCCATCAT ATCAGTGGTA CTGATGATTG GGGTAATCTC TTCCATCCTG TACTTCCTGG CCAACCAGCT GACCGATTTG TGGAAAGACT GGCCCTTGCT TAAGCACCAG GCCGAAACCT CGTTCCATGA TGTGCAACAC TGGATTTCCA GAACATTTGG CGTAAATGCA CAGAAACAGA TAGATTACCT TAAGAATAGT GCCAGCAGCG CTGTAGCCAC CAGTGCAACG GTGCTGGGCG CTACGTTGCT TACCGTATCC TCTACCCTTT TGTTCTTATC TTTCCTTCTG TTGTTCACTT TTTTTATACT CAACTACAGG GGCATTCTGT TTAACTTCCT GAGTTCTGTG TTCGAGGAAA AACATAAACA AAAAGTAAGC GAAATTGTAA GACAGATCCA GTACATCATA AAAAAATACA TCACAGGGCT TTTTTTACAA ATGTTTATCG TTACCGTATT GATGATATTT ACCCTGTGGG TATTGAACGT AAAATATGCC GTTTTGCTGG GCCTGATTTC GGGGATTTTT AACATTGTAC CTTACCTGGG CATATTTACC GCATTACTGA TCAGTGTGCT GATCACTTTT GCGACTGCCG GAGCGGCCAA GGTATTGCTG GTTTTAATTG CTTTTGTAAG CATCCATGCA CTTGATGGAA ATGTGCTGAT GCCATTGGTA GTGGGCTCTA AAGTAAAGAT CAATGCACTG TTTGCTTTCA TCGGCATTGT AGTGGGCGAA ATGATCTGGG GTATATCTGG TATGTTTTTA TGTATCCCCT ACCTGGCCAT GCTTAAAATT ATTTTTGATA AGGTAGAGCA GCTTAGGCCC TGGGGAATTT TACTGGGTGG GGAAGAGAAG CCGCAAAAGA AACGAAGGGT ATACCGCATT ACCAAAAAGA TCAAACTGGA AGAAAAAGAA TAA
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Protein sequence | MTQVSLPFYT KLAMVLFSII SAGYLAILGQ TILAPLLTSF LLALLLLPMA NFMEQKWRFK RSIAAIISVV LMIGVISSIL YFLANQLTDL WKDWPLLKHQ AETSFHDVQH WISRTFGVNA QKQIDYLKNS ASSAVATSAT VLGATLLTVS STLLFLSFLL LFTFFILNYR GILFNFLSSV FEEKHKQKVS EIVRQIQYII KKYITGLFLQ MFIVTVLMIF TLWVLNVKYA VLLGLISGIF NIVPYLGIFT ALLISVLITF ATAGAAKVLL VLIAFVSIHA LDGNVLMPLV VGSKVKINAL FAFIGIVVGE MIWGISGMFL CIPYLAMLKI IFDKVEQLRP WGILLGGEEK PQKKRRVYRI TKKIKLEEKE
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