| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1211 |
|---|
| Symbol | |
|---|
| ID | 8252309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1431063 |
|---|
| End bp | 1432394 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644934866 |
|---|
| Product | L-lysine aminotransferase |
|---|
| Protein accession | YP_003091491 |
|---|
| Protein GI | 255531119 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00699] 4-aminobutyrate aminotransferase, eukaryotic type
[TIGR03251] L-lysine 6-transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.992167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAC TCACTGTAGC TCCCGATAAG GTAAACGAAA CGCTAAGCAA ACACATTCTG
GCTGATGGTT TTGATTTGAC TTACGACATG GAAAAAAGTC AGGGGGCTTA TATTTATGAT
TCCAAATATA ACCGTAAGCT GCTCGATTTT TTTACCTGCT TTGCTTCGGT CCCTTTAGGT
TACAACCATC CTAAAATGAT CAATGATGAA GCTTTCAAAA GTAACCTTTT GCAGGCAGCA
CTGGCCAACC CTTCCAACTC TGATGTATAT ACGCAGCAGT ATGCACAGTT TGTAGATACA
TTTTCTAAAC ATGGTATTCC TGAATACCTG CCCCATGCTT TTTTTATTGC CGGCGGTGGA
CTGGCTGTTG AGAATGCCAT TAAGGTAGCG ATGGACTGGA AGGTGCAAAA GAATTTTGCC
AAAGGCTATA AAGAAGAAAA AGGCTTTAAG GTTTTACATT TTGAAAAAGC CTTTCATGGC
CGTACCGGTT ATACTTTGAG CCTGACCAAT ACCCTGCCCG ATAAAACCAA ATGGTTTGCC
AAGTTCGACT GGCCAAGGGT GTCGGTACCC ACAGTTAAAT TTCCTTTACA GGCTGAAAAC
TTAAAACTGG CCATCGAAAC TGAAGAGACC TCAATTGCCC AGATTAAACA GGCTTTTGCC
ACACATAAAG ATGATATCTG CGCCATTATA GTAGAACCTG TACAATCTGA AGGGGGCGAC
AACCACCTGC GGGAAGAGTT TCTGGCACGT CTGAAAAGTA TTGCTGATGA GCAGGATGCC
TTCCTGATCT ATGATGAGGT ACAAACCGGA GTTGGCCTGA CCGGCAAATT CTGGTGCCAC
CAGCATTTCA GCGAAAAAGC ACGTCCGGAT ATTATCGCCT TTGGCAAAAA GATGCAGGTA
TGTGGCATCC TGGTTGGCCA TAAGGTGGAG CAGGTGGAAG GTAATGTTTT TAAAGTTCCT
TCGCGCATTA ACTCTACCTG GGGTGGTAAC CTGGTAGATA TGGTACGTTC TTCACAGATC
CTGCAGATTG TAGCGGAAGA CAATTTATGT AACAATGCCG CTGTAGTTGG CCGTTACTTG
CAGGAGCAGC TGGAACAGCT TGCTGCTAAA TACGATAAAA TGGGCAATGT GCGCGGAAAA
GGTTTGCTTT GTGCCTTCGA TTTTGCCAGT AAGGCCATGC GTGATGCCTT CATACAAAAA
GGAATGGAAA ACAATGTGAT GTTTTTAGGC TGCGGGAACC AGACCATACG TTTCAGGCCG
GCCTTATGTA TAGAGAAAAA ACACATTGAC GAAGGTATGG CAGTGATGGA ACGTATATTA
CCTGCCTTAT AA
|
|---|
| Protein sequence | MYQLTVAPDK VNETLSKHIL ADGFDLTYDM EKSQGAYIYD SKYNRKLLDF FTCFASVPLG
YNHPKMINDE AFKSNLLQAA LANPSNSDVY TQQYAQFVDT FSKHGIPEYL PHAFFIAGGG
LAVENAIKVA MDWKVQKNFA KGYKEEKGFK VLHFEKAFHG RTGYTLSLTN TLPDKTKWFA
KFDWPRVSVP TVKFPLQAEN LKLAIETEET SIAQIKQAFA THKDDICAII VEPVQSEGGD
NHLREEFLAR LKSIADEQDA FLIYDEVQTG VGLTGKFWCH QHFSEKARPD IIAFGKKMQV
CGILVGHKVE QVEGNVFKVP SRINSTWGGN LVDMVRSSQI LQIVAEDNLC NNAAVVGRYL
QEQLEQLAAK YDKMGNVRGK GLLCAFDFAS KAMRDAFIQK GMENNVMFLG CGNQTIRFRP
ALCIEKKHID EGMAVMERIL PAL
|
|---|
| |