| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1145 |
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| Symbol | |
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| ID | 8252239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1341772 |
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| End bp | 1342701 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644934796 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_003091425 |
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| Protein GI | 255531053 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.500539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAAAG TTAAACACGT ACTACTATTA AGTTTTACCA TTATAGCCCT GACCATTGCG
GGCTGCAAAA GCCAGTTTGA AAAGATCAGA CTGAGCAACG ATGTAGCCAA AAAGTATCAG
GAGGCAATGC GTTTGTATAA CAAAAAGAAC TATGCAAAGG CTTTGATCTT ATTTGAAGAT
CTTTCTCAGA AATACAGAGG CCGTGCAGAA GCTGAAGAGT TAAACTACCA TTATGCTTTA
ACCCTGTATA AATTAAAGGA CTACACTACT GCAAGGTATC AGTTTAAATC ATTTGCAGAT
ACTTACCCAA CCAGTAAATA TGCAGAAGAA TGCAGATACA TGGGTGCCTA TTGCTATTAC
CTGGATTCTC CGGCCCCAAG CCTTGATCAG GAGAACACGT ATAAAGCAAT AGATGCCTTG
CAATTGTTCA TTAACTTTTA TCCTAAAAGT GAGCGTGCCG CCGATGCTGC AAAATACATA
GGACTTTTGC GTGCCAAGCT TGAAGATAAA GCATATAACA ATGCCCGGTT GTATTACGAT
CTGGGTGGTT ATGATGTAAG TAATTATAAG GCTGCTGTTA TAGCATTGAA AAATGCGCAG
ATTGATTTCC CGGATATTAA ATATGCTGAA GAAATGGATT TCCTGATTAT CAAATCTCAG
TTCGCTTATG CAAAGAACAG TTTGGAAACA CGCCAGGAAG ACCGTTACAA CGAAGCCATT
ACTTATGCAG ATGAATTTGT AGAGGCACAT CCGCAAAGTA AATTGCTTGA AGATGCAAAA
GCTTTAAAGA AAAATAGCGA ACAAGGTATA GAAAATGCAA AACATTTTTT GGCTGAACTG
GCCAAAAATC AGGAAAAATA CAGAGCATTA ATGGCAAAAG ATGCCAGATC AGACAGTACC
ACTACGACAA TAAAAACCCC CATCAAATGA
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| Protein sequence | MFKVKHVLLL SFTIIALTIA GCKSQFEKIR LSNDVAKKYQ EAMRLYNKKN YAKALILFED
LSQKYRGRAE AEELNYHYAL TLYKLKDYTT ARYQFKSFAD TYPTSKYAEE CRYMGAYCYY
LDSPAPSLDQ ENTYKAIDAL QLFINFYPKS ERAADAAKYI GLLRAKLEDK AYNNARLYYD
LGGYDVSNYK AAVIALKNAQ IDFPDIKYAE EMDFLIIKSQ FAYAKNSLET RQEDRYNEAI
TYADEFVEAH PQSKLLEDAK ALKKNSEQGI ENAKHFLAEL AKNQEKYRAL MAKDARSDST
TTTIKTPIK
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