Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1130 |
Symbol | |
ID | 8252224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1322273 |
End bp | 1322995 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644934781 |
Product | protein of unknown function DUF1080 |
Protein accession | YP_003091410 |
Protein GI | 255531038 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.342121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA AAATCAGCTT CCTTGTAATT GTTTTAAACA TAACAGGAAC TATTGTGTAT GGAACACCTA AACCACCAAT TAAGAAATCG GTACAAGCAA AAACCAGTTG GATAAGTTTG TTTGATGGGC AAAGTTTAAA AGGCTGGCAT ATTTTTAATA AAACCGGACA AATTGAAAAC TGGACAGTTG AAGATGGCGC AATGGTGTGT CATGGGTTTA AAGGCCCAAG TGGTGCTGGT GATATTGTGT CGGACCTTAA ATTTGAAAAC TTTGAACTGA GCTGGGAATG GAAGGTAGAT AAAGGAAGTA ACAGTGGTGT TTTTTACCAT ATTTTAGAAG GACCAAAATA CCATAGAGCT TCTGAAACCG CACCGGAATA TCAGATCATT GATGATGCCG GGTTTCCTGC AAAACTGGAA GAATGGCAAA AAACAGGTGC AGATTATGCA ATGAATGTAC CTAACGACAA AAAGAAGTTA CAACCGACGG GAACCTGGAA TACAAGCAAA ATCATCTTTA ATAAGGGCCA TGTAGAGCAT TGGCTAAACG GAAAGAAGAT TGTTGAGTTT AATGCCTGGA CTGAAGAATG GAATAGACAA AAGAAAGAAG GAAAGTGGAA GGATTATCCT GATTACGGAA TTGCTAAAGC CGGATCTGTT GGTTTTCAGG ATCATGGGAA CAAGGCCTAT TTTAAAAATA TAAAGATCAG GGAAATAAAA TAA
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Protein sequence | MANKISFLVI VLNITGTIVY GTPKPPIKKS VQAKTSWISL FDGQSLKGWH IFNKTGQIEN WTVEDGAMVC HGFKGPSGAG DIVSDLKFEN FELSWEWKVD KGSNSGVFYH ILEGPKYHRA SETAPEYQII DDAGFPAKLE EWQKTGADYA MNVPNDKKKL QPTGTWNTSK IIFNKGHVEH WLNGKKIVEF NAWTEEWNRQ KKEGKWKDYP DYGIAKAGSV GFQDHGNKAY FKNIKIREIK
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