Gene Phep_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0981 
Symbol 
ID8252075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1147774 
End bp1148538 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID644934636 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003091265 
Protein GI255530893 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.659236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACG AAGTAATAGA CGAAGGTGGG TTTAAATATA TAGAAGCCGG AAAAGGTGAA 
ACCCTGGTAT TACTTCATGG TTTAATGGGA GAATTGAGCA ACTGGGAGCC GGTAATTGAC
CGTTTTAAAG AAAATTACCA TGTTCTGGTG CCTATTTTGC CTATTTATGA GCTTCCTATC
CTGACACTGG GGGTGAGAAG TTTGTCTAAA TACATCAACA GATTTTTAAA ATATAAGAAA
GTTAACCAGG TGGTTCTGAT TGGTAATTCC CTTGGTGGCC ATGTGGGGCT GGTATTTACC
ATCGCGCATC AGGAAAATGT AAAGGCCCTG GTACTTACGG GCAGCTCTGG TTTATACGAA
AATGCTTTTG GCGGTTCTTT TCCAAGAAGG GAAAGCTACG ATTACATCCG TGAAAAGGTA
GAGTTTACCT TTTATGATCC GGCAACGGCA ACCAAGGAAC TGGTAGACGA GGTATATAAA
ACGGTAAATG AACGTTCCAG GGTAATCCGG ATTCTGGCCC TGGCCAAATC GGCCATAAGA
CACAATATGT CTAAAGATCT TTCGAGGATA ACCATACCTG TTTCCTTAAT ATGGGGAATG
CAGGATAAGG TAACCCCACC GGATGTGGCA GAAGAATTTC ATGAGCTTTT ACCCAATTCG
GAACTGAACT GGGTAGATAA ATGCGGACAT GCCCCTATGA TGGAGCGTCC GGAGATCTTT
AATGAATACC TTCAAACTTT TTTAAACAGA ATTTTACTTA AATAA
 
Protein sequence
MTYEVIDEGG FKYIEAGKGE TLVLLHGLMG ELSNWEPVID RFKENYHVLV PILPIYELPI 
LTLGVRSLSK YINRFLKYKK VNQVVLIGNS LGGHVGLVFT IAHQENVKAL VLTGSSGLYE
NAFGGSFPRR ESYDYIREKV EFTFYDPATA TKELVDEVYK TVNERSRVIR ILALAKSAIR
HNMSKDLSRI TIPVSLIWGM QDKVTPPDVA EEFHELLPNS ELNWVDKCGH APMMERPEIF
NEYLQTFLNR ILLK