Gene Phep_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0929 
Symbol 
ID8252023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1080898 
End bp1082805 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content44% 
IMG OID644934584 
ProductATP/GTP-binding protein, putative 
Protein accessionYP_003091213 
Protein GI255530841 
COG category[S] Function unknown 
COG ID[COG3410] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000692715 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000771269 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGATTAT ACGCTGGCTC CTCAACTGAA TTTATAGCCC TATGCAATAA CAATAAAATC 
GCTGATCTTC TGGAAGAAGC ATACTTAGCG GAATTTTTGT GTACACCCTC AAAATCTGAA
ATAACTTCCT GGAAAAGTTC ATTATGCCAT TTGGCGGAGC TGCTTGACCG TGCAGGCCTA
AAAGACCTGG GTATAATGCT GGAGTACAAA CTGCCACTGA GTGGCAAAAG AGTTGATGCC
ATCCTTTGCG GTACAGACCA TGCACAAAAT AAACAGGCTA TCCTGATTGA ACTTAAACAG
TGGGAAGAGT GCAGGCTCAC AGATTATGAC AGTGATTATG TGGTAACCTG GATTGGAGGG
AAAAACAGGT CTGTGCTCCA TCCCAGTGTT CAGGTAGGTA ATTACATGTA TTACCTCTGG
AACAATAGTG AGGTTTTTTA CAGGTCCGAC AGGCCTGTGA AACTTTCAGC CTGCAGTTAT
TTGCACAACT ATAGCCTTTT AGACGATGAC GTAATACTTG ATAAGCGTTT TGAAAATGCC
ATCAGAAAGT TTCCGCTGTT TACTGCTGAT GAAGCAGCAG CCTTCATTGA TTTTATTGCC
GAAAGGGTGG GTTCGGGAAA GGGGATGGAG GTGCTGGCGG AAATTGAAGA GAGCGAACTC
AAGCCATCGC AGAAGATTCT GGATAAAGTT TCTACAGCAA TCAGGCAAAA GCTAAAGGGC
GAACTCACTT TATTCGGGAG ATGTAAATCT AAAAAGGATT ACATATTACT GGATGAGCAA
CTTGTGGTGT ACGACCTTGT GATGAGCCTT GCGCTCAAGG ACATAAAAGG TAAGCATGCA
GTTGTGGTAA GAGGCGGGGC TGGTACGGGT AAATCGGTGA TTGGCCTGCA GCTCCTGGCC
GACCTGACTG CTTCCCGGTT AAATGCCCAA TATGCCACCG GATCTAATGC ATTTACAGAA
ACCTTAAGAG AAATACTGGG CCAGGGATCA TCGTCGATAC TCAAATATTT TATGTCGTAC
ACTACTGCTG CACCTCAGTC TGTTGATGTT TTGCTTATGG ATGAGGCACA TCGGATCAGG
GAGAAAACCG CAGGATTTTC TAAACGTACA GACCTTCTTC AAATTCAGGA ATTGCTAAAT
GCAGCTAAGG TCTGTGTGTT TTTTGTTGAT GATTACCAGG TGGTCCGCCG CGAGGAAATA
GGAACATCAG GCTTTATCAT TGAGCAGGCG GAAGCTGCAG GGTTTAAGGT TTACGAGTTT
GACCTGAAAG CCAATTTCCG GAATGGAGGG TCTGAACGGT ATAGCCATTG GATTGACCAT
ATGCTCCAGA TCAGGGAAAC AGCCCATACA GAATGGGTAG ATGAAACAAA TTTCAAATTT
GAGATTGTGG ATGCTCCGGA AACCCTGGAA CGGATTATCC AGGAAAAGGC TATGGAAGGA
TCAACTGCAA GAATTACCGC CGGGTTTTGC TGGGACTGGA CGAAACGACT GGATAAAGAC
GGGCAATTGG TTAAAGATAT AAGAATTGGC AGCTATCACA GGCCGTGGAA TGCCTACAAT
AATTTAGAGG GACTACAGAA AGAAATTCCC AAAGCCAAAT TCTGGGCCTA TCAAAGGGGA
GGAATTGATC AGATTGGGTG TATTTTCACT GCACAGGGAT TTGAGTTCGA TTATACAGGT
GTCATCTTTG GTAAGGATAT CAGATATAAT CCAACTACGG GCCAGCTGGA AGGTTTTGAA
GAATTTAGCT ATGACTATCA GGTTAGAGGA ACACATTTTC TTCGCTTAAT TAAAAATACT
TATCGGGTGT TGTTGGGAAG GGGAATGAAG GGTTGTTATG TGTATTTTAT GGACAAGGAG
ACGGAAAGTT ATTTTAGGAG CAGGGTGAGG GAAAATAAAG GGTTATGA
 
Protein sequence
MRLYAGSSTE FIALCNNNKI ADLLEEAYLA EFLCTPSKSE ITSWKSSLCH LAELLDRAGL 
KDLGIMLEYK LPLSGKRVDA ILCGTDHAQN KQAILIELKQ WEECRLTDYD SDYVVTWIGG
KNRSVLHPSV QVGNYMYYLW NNSEVFYRSD RPVKLSACSY LHNYSLLDDD VILDKRFENA
IRKFPLFTAD EAAAFIDFIA ERVGSGKGME VLAEIEESEL KPSQKILDKV STAIRQKLKG
ELTLFGRCKS KKDYILLDEQ LVVYDLVMSL ALKDIKGKHA VVVRGGAGTG KSVIGLQLLA
DLTASRLNAQ YATGSNAFTE TLREILGQGS SSILKYFMSY TTAAPQSVDV LLMDEAHRIR
EKTAGFSKRT DLLQIQELLN AAKVCVFFVD DYQVVRREEI GTSGFIIEQA EAAGFKVYEF
DLKANFRNGG SERYSHWIDH MLQIRETAHT EWVDETNFKF EIVDAPETLE RIIQEKAMEG
STARITAGFC WDWTKRLDKD GQLVKDIRIG SYHRPWNAYN NLEGLQKEIP KAKFWAYQRG
GIDQIGCIFT AQGFEFDYTG VIFGKDIRYN PTTGQLEGFE EFSYDYQVRG THFLRLIKNT
YRVLLGRGMK GCYVYFMDKE TESYFRSRVR ENKGL