Gene Phep_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0793 
Symbol 
ID8251882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp941051 
End bp941413 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content39% 
IMG OID644934443 
Productresponse regulator receiver 
Protein accessionYP_003091077 
Protein GI255530705 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT GTATTTATGT TGTAGAAGAC AACGCGGCAA TCAGAGATAT CATTGAATAC 
ATGCTGACTG AAGATGAGTA TGAAGTAGTG GCATCGCCTA CTGTTAATGA TTTCTGGAAA
CAGATGCAAA AGCGTAATCC CGACATGGTA GTTCTTGATA TCATGCTGCC GGATGGGAGC
GGACTGGAAA TTTGTGAAAC ACTGAAAAGA AATGTAAAGA CCCATGACAT TCCGGTAATG
ATGATGTCGG CCAACAATTA CCTGAATAAG GTAAAGGCGA AATGTATAGC GGATGAGTTT
ATCAATAAGC CATTTGACCT GAATGATTTT GCCAACAGAA TTGAGCATTA TGTGCACAAT
TAA
 
Protein sequence
MKKCIYVVED NAAIRDIIEY MLTEDEYEVV ASPTVNDFWK QMQKRNPDMV VLDIMLPDGS 
GLEICETLKR NVKTHDIPVM MMSANNYLNK VKAKCIADEF INKPFDLNDF ANRIEHYVHN