Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0771 |
Symbol | |
ID | 8251860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 903311 |
End bp | 905086 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644934421 |
Product | RagB/SusD domain protein |
Protein accession | YP_003091055 |
Protein GI | 255530683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA AATCATTTTT ATCCGCAATA ACCTTTCTTT TTTTTACCAG CATACTTGGC CTGGTTTCCT GTAAAAAGTA TCTTGACCTG TCGCCACCAT CCGCATTTGA TGAAAAGTTT GTGTTCAGCA ATGTGGCCAA TACTACCAGT GCCCTGATGG GTGTTTATGA ACAGCTGACC GGCGACAATG GCTATGGAAG CAGGTTGAGC ATGATGTACC CCTACGATAC GGACGAATTT ATAGGTGTTA CCAATGCTTC TGCACCTGAT AACAATTCGC GCGACCTTTC GCGGTATAAC CTGCAACCTA CAAACGGACA GCTTACCCTG CCTTTTCAAC AATTGTATAC CGGAGTGGAG CGGGCCAATA TCTGCATCAA GAACATTCCG GCAATGGCCA TGTACAGCAG CGGCTCGGAA ACTGAGAAAC AGCAGCTCCG CAGGTTATAC GGCGAGGCGC TTACCCTGCG TGCGCAGTTT TATCTGGAAC TGCTCAGGAA CTGGGGGGAT CTTCCGGCCA TATTTGAACC GGCAATTGAC CAGGCAGATC TTTACCTGCC AAAAACAGAT CGCGATGTGA TTTACGACCG TTTGCTGGAT GATCTTAAAT TGGCCGCCGA GCTGGTGCCC TGGCGTAATG ATCCGGGTGT GGTAGCGGAT GAACGCATTA CCAAAGGAGC TGTAAAAGGC TTAAGGGCAC GTATTGCCCT TTTCAGAGGT GGATATGCGT TAAGAAGGGA ACCACAGCAG ATGGAACGGA AAGCAGATTA CCTGAAATAT TACCAGATTG CGCGCGATGA ATGTAATGAG GTGATGCAGC GCCGGGATAA ACATACACTC AATCCGAATT TCCAGGATAT ATTCAAAAAT AATATTGATG CTTTTAAAAT AGAGCCCAAC GGTGAAGTAA TGTTTGAAGT GGCCCTGGGT AAGGACATTA GCGGACGTAT TGGTTATTAT GACGGCCCGC GCTTTTATGT TTCTTCTACC ACTGCTCAAC AGGGTAACAG CTCTGTTAGG GCTGTGCCCG TATATTTTTA TGCATTTAAT GAATTGGATA CCCGAAGGGA TGTTACGCTG GCGCCTTATT ACAACAATGC CGACAAGACC AAAGCGGTGC AAACCATGGT AAACATGACC TGCGGTAAGT TCAGGGCCGA CTGGTGGAAT CCGGCGCCAA CTTCTGCCAG TCAGCAAACC GGCATCAACT GGCCTATTCT TCGGTTCTCG GATGTACTGC TGATGTTTGC TGAAGCTGAA AATGAACTAA ACAATGGTCC AAGTCCGGCT GCAAAAACAG CGTATGAAGA GGTGAGAAAA CGTGCTTTTA AAGGCAATGA AAGTGCTATA GGCATTACCC CGGGTGGTAA AGCCGATTTT TTTAATGCCA TTGTAAACGA ACGGTATTTT GAGTTCGGCG GAGAAGGAGT TAGGAAATAT GACCTGATCC GCTGGAACCT CCTGGCTGCC AGGATCAGTG AGACAAGGGC AAATTATACC AAAATGCTGA ACAAACAGGC CCCTTACAAT AATCTGCCAC AGAATATGTA TTATAAAACA GCCTCTCCGG ATGTGATTTT CAGCAATTCA TTGTATGCTC CAACTCCGGC AACTTTACCT ACCGGATATA CCAGGGTAGC CTGGGTAAGT TCCATTACAA CTACCTGGAT TACCAATTTT GCCCAGTATT TTAAGCCCGA TCACAGCGAA CTGATGCCTT TGCCACAATC TGTGGTAGAA TCGAATCCAA AGCTAAAGCA GGATTATGGC TACTAA
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Protein sequence | MKKKSFLSAI TFLFFTSILG LVSCKKYLDL SPPSAFDEKF VFSNVANTTS ALMGVYEQLT GDNGYGSRLS MMYPYDTDEF IGVTNASAPD NNSRDLSRYN LQPTNGQLTL PFQQLYTGVE RANICIKNIP AMAMYSSGSE TEKQQLRRLY GEALTLRAQF YLELLRNWGD LPAIFEPAID QADLYLPKTD RDVIYDRLLD DLKLAAELVP WRNDPGVVAD ERITKGAVKG LRARIALFRG GYALRREPQQ MERKADYLKY YQIARDECNE VMQRRDKHTL NPNFQDIFKN NIDAFKIEPN GEVMFEVALG KDISGRIGYY DGPRFYVSST TAQQGNSSVR AVPVYFYAFN ELDTRRDVTL APYYNNADKT KAVQTMVNMT CGKFRADWWN PAPTSASQQT GINWPILRFS DVLLMFAEAE NELNNGPSPA AKTAYEEVRK RAFKGNESAI GITPGGKADF FNAIVNERYF EFGGEGVRKY DLIRWNLLAA RISETRANYT KMLNKQAPYN NLPQNMYYKT ASPDVIFSNS LYAPTPATLP TGYTRVAWVS SITTTWITNF AQYFKPDHSE LMPLPQSVVE SNPKLKQDYG Y
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