| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0753 |
|---|
| Symbol | |
|---|
| ID | 8251842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 873908 |
|---|
| End bp | 874639 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644934403 |
|---|
| Product | UbiC transcription regulator-associated domain protein |
|---|
| Protein accession | YP_003091037 |
|---|
| Protein GI | 255530665 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.119752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA CAATCAATCA CAAAAGTCAG GTTCCTTTAC ATCTGCAGGC AGAAGAACTT
GTACGCAAAC TGATCAACGA CCCTCAGTTT AAGGATGGTA AGTTACTGCC CAATGAGGTT
GAACTGGCCA GGCAGCTAGG TATTTCCAGG ACTACTTTAA GGCAAGCCCT AAATAAACTG
GTATATGAAG GACTCCTGAT CAGAAAAAAA GGTGTCGGCA CCAAAGTTGC CGATATGCCG
GTAAGCTCCA AATCCAACAA CTGGCTAAGC TTCTCCCAGG AAATGCAGGC CAGAGGTATT
GCCATCAAGA ACTTCGAACT GCATGTCAGC TGGGTTTATC CGGATGATAA AATCGCTGCC
TTCTTCGAAA TTTCGACAGA CCAGAAAATC CTTAAACTGG AAAGGCTAAG AGGCCGGATG
GAAGGGCCCT TTGTTTATTT TGTTTCATAT TTTCATCCGC GGATCGGCTT AACAGGCGAG
GAGGAGTTCA GAAGACCTTT ATACGAAATC TTGGAAGCAG ATCACCATGT AATTGCCCAA
TTGTCCAAAG AAGAGATCAG CGCAAAAGCG GCCGACAAAT TTATTGCTGC CAAACTGGAA
ATAGAGCCCG ACAGCCCCAT TCTTTTCCGT AAAAGGTTTG TGTTTGACCA GAGCGATAAG
CCTATAGAAT ACAACCTGGG CTATTATAAG GCCGATAGTT TTGTATATAC CGTTGAAAGC
CGAAAAGAGT AA
|
|---|
| Protein sequence | MKLTINHKSQ VPLHLQAEEL VRKLINDPQF KDGKLLPNEV ELARQLGISR TTLRQALNKL
VYEGLLIRKK GVGTKVADMP VSSKSNNWLS FSQEMQARGI AIKNFELHVS WVYPDDKIAA
FFEISTDQKI LKLERLRGRM EGPFVYFVSY FHPRIGLTGE EEFRRPLYEI LEADHHVIAQ
LSKEEISAKA ADKFIAAKLE IEPDSPILFR KRFVFDQSDK PIEYNLGYYK ADSFVYTVES
RKE
|
|---|
| |