| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0682 |
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| Symbol | |
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| ID | 8251770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 791962 |
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| End bp | 792705 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934331 |
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| Product | regulatory protein DeoR |
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| Protein accession | YP_003090966 |
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| Protein GI | 255530594 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.922623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGAG AAGAGCGACA AAACTACATA TTAAATCAGA TCAGCATTTA CAGCAAGGTT
CATACATCCG ACCTTTGTGC AGCGCTTGAT GTTTCGTTAG ACACAGTGAG ACGGGACCTT
AGCGATCTGG AAAATGAAGG TAAACTGGTT AAAGTGCACG GAGGTGCAAT CTCAAAATCC
TTTCATTATC CTTTTCAGCA ACCAGCGGTA TATGCAAAAG AAAAAAAGAA AGAAATTGCC
AGAAAGGCTT TAGAGCTGAT CGAGGACGGG ATGACCATTC TTGCCGGAGG GGGAACGGTA
ATGCTTGAAC TGGCAAAAAT GATCCCTGAA GATTTAAAAG GTACCTTTTT TACGGTTAGC
CCCCTGGTTG CACTGGAAGT TACCCAAAGA TCAACAGTTA ATGTGATCCT GCTGGCGGGC
AAACTTTCCA GAAACTCTTA CATCTGCATG GGCTCTACTG TAATCAGGCA GTTATCAGAG
ATCAGGGCAG ACCTCTGCTT TTTGGGTACC AATGGAATTT CTATAGAGGA GGGGGTAACA
GATATGGACT GGGAAGTGGT ACAGGTGAAG CAACAAATGA TCCGTTCGGC CAGAAAGACG
GCCATTTTAA CCATTGCAGA AAAAATCGGC TCTGTACAAA ATTTAACGGT CTGCAACTTA
AATGCAGTTG ATTACCTTAT TACAGAGCTT CCAGCAGCCG ATCCAAAACT GGAAAAATAC
CGGCAGCTCT TCAAAGTCAA ATAA
|
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| Protein sequence | MLREERQNYI LNQISIYSKV HTSDLCAALD VSLDTVRRDL SDLENEGKLV KVHGGAISKS
FHYPFQQPAV YAKEKKKEIA RKALELIEDG MTILAGGGTV MLELAKMIPE DLKGTFFTVS
PLVALEVTQR STVNVILLAG KLSRNSYICM GSTVIRQLSE IRADLCFLGT NGISIEEGVT
DMDWEVVQVK QQMIRSARKT AILTIAEKIG SVQNLTVCNL NAVDYLITEL PAADPKLEKY
RQLFKVK
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