Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0661 |
Symbol | |
ID | 8251749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 769941 |
End bp | 770558 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934310 |
Product | polysaccharide deacetylase |
Protein accession | YP_003090945 |
Protein GI | 255530573 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTGG TCAAATCACC ACTATTGTTA AAATGGTATT ACCCAAAGTT AACATGGAAT AAAAACCGCG ATCAAAAAGT TATTTATTTA ACCTTTGACG ATGGACCCAT ACCCGATGTT ACAGCTTTTG TTTTAAAAAC TTTAAAAAAT TTTGATGCTA AGGCAACTTT TTTTTGCATC GGTGACAATA TCGTTAAGCA TCCTGATATT TTTGAACAGA TTAAAAGAGC AGGACACCAG ATTGGCAACC ACACATTTAA CCACCTGAAA GGCTGGATAA CTGAGGACCA ATACTACCTC GATAATTTTC GGCAATGTCA GGAACTCACG GGTACCAGCT TATTCCGCCC CCCTTATGGC CGCATCAAAA AATCACAGGC CTCGGGCATC AGGGCTTTAA TGCCGGAAAT GCAGCTGATC ATGTGGGATG TACTGAGCGG GGACTTTGAC ACCGGCCTAT CGCCCCAAAA GTGCTACCAA AATGTGATCA GACATACACG TAATGGTTCT ATCATTGTAT TCCACGACAG CCTGAAGGCT TTTGACAGGC TGGAATATGC TTTGCCCCGC TGCCTGCAGT ATTTTAAGGA AAAGGGTTTT GAGTTTGCCT TACTCTGA
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Protein sequence | MYLVKSPLLL KWYYPKLTWN KNRDQKVIYL TFDDGPIPDV TAFVLKTLKN FDAKATFFCI GDNIVKHPDI FEQIKRAGHQ IGNHTFNHLK GWITEDQYYL DNFRQCQELT GTSLFRPPYG RIKKSQASGI RALMPEMQLI MWDVLSGDFD TGLSPQKCYQ NVIRHTRNGS IIVFHDSLKA FDRLEYALPR CLQYFKEKGF EFALL
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