Gene Phep_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0627 
Symbol 
ID8251715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp734630 
End bp735019 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content40% 
IMG OID644934276 
Product30S ribosomal protein S11 
Protein accessionYP_003090911 
Protein GI255530539 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA GTAAAAAAGT TACCAAAAAG CGTATTGTTG TTATTGAGCC TGTTGGTCAG 
GCACACATCA ATGCTACTTT TAACAATATC ATTGTTACCT TAACAAATAA CAATGGTCAA
ACTATTTCAT GGTCTTCTGC AGGTAAAATG GGCTTTAAAG GTTCTAAAAA GAACACGCCT
TATGCAGCAG GTCAGGCTGC ATCTGATTGC GGTAAAGTAG CATTTGATCT GGGGCTGCGT
AAAGTAGATG TTTTTGTTAA AGGTCCGGGT TCTGGTCGTG AGTCTGCAAT TAGAACATTG
CAGGTTTCAG GTATAGAAGT AACCTCTATC AAAGATATTA CCCCGCTTCC ACACAATGGA
TGTCGTCCTC CTAAGAAGAG AAGAGTTTAA
 
Protein sequence
MAKSKKVTKK RIVVIEPVGQ AHINATFNNI IVTLTNNNGQ TISWSSAGKM GFKGSKKNTP 
YAAGQAASDC GKVAFDLGLR KVDVFVKGPG SGRESAIRTL QVSGIEVTSI KDITPLPHNG
CRPPKKRRV